| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1807 |
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| Symbol | |
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| ID | 4172055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2171621 |
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| End bp | 2172403 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054817 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_661382 |
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| Protein GI | 109898127 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTC GAGGCGCTCT AACAGTAAAC ACAAGGTGGA TGACGCTTGT TTTCTTCCTT
TTGTCTGTTA ATGCGTTGGC TGAAGCGAAA ACGAACATTA TCGAGGTAGC CGTGGGCTGG
TCCAAACCAC CCTATGTTAA CTCGGCGGAT AACAGTGGGT TTGAGCTTGA TCTCGCTCGC
CACGTTTTTA CTAAAATGGG TTATACCTTT AAACCAATCT ATGTCCCCTA TGGACGTAGC
CTCAGCATGT TAAAAAACCA GAACGTTCAG GCTGCGCTAA CAGTCAGTGA AAAAGCGGAT
GTATCCGGTA TTTCCGTAAG TGATGTTTAC ATCGAATACC AAAATGTGGC GGTGACACTA
CAGGCCAGAG ATATTAAGTT AAAACAGCCG AAAGATTTAC AGCAGTATGT CATGTCAGCT
TATCAAACCG CTTCTAAGAA TCTCGGCGAA GAGTTTACAC TTGCCGCCCA CAAAGCTCCT
CTTTACGTTG AACTGCCGGA CCAGCAGAAG CAAGTCGCGA TGCTGTTAAA TGGCAATGTG
TCGGTGGTGA TCATGGACGT AAACATTTTT ACTCACCTGC AGGCCCTGCT AGAGCCCAGT
CATCAACTGA CCCCGGTGAC TGTGCATAAC CTTTTTGCGC CAAATCGTTA CAGAGTGGGT
TTCTCAAACC AGCAGCTTAG AGATAGATTC AACCAAGCGT TACTCGAAGT ACAAGAATCT
GAGGCATTTG AAGAACTTGT GCAAAAATAC AGCATGTACC GAGATGATGC CAAATTGAAC
TAA
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| Protein sequence | MNFRGALTVN TRWMTLVFFL LSVNALAEAK TNIIEVAVGW SKPPYVNSAD NSGFELDLAR
HVFTKMGYTF KPIYVPYGRS LSMLKNQNVQ AALTVSEKAD VSGISVSDVY IEYQNVAVTL
QARDIKLKQP KDLQQYVMSA YQTASKNLGE EFTLAAHKAP LYVELPDQQK QVAMLLNGNV
SVVIMDVNIF THLQALLEPS HQLTPVTVHN LFAPNRYRVG FSNQQLRDRF NQALLEVQES
EAFEELVQKY SMYRDDAKLN
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