Gene Patl_1801 details

Gene Information

• Locus tag: Patl_1801
• Symbol: sucC
• ID: 4172049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 2162787
• End bp: 2163956
• Gene Length: 1170 bp
• Protein Length: 389 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054811
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_661376
• Protein GI: 109898121
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.198712
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTGC ATGAATATCA GGGTAAACAA TTATTCGCTG AATACGGTTT ACCTGTATCT 
GAAGGATATG CTGCGGAAAC TCCGCAGGCG GCAGTTGAAG CTGCAGATCG TATTGGCGGT 
ACTGAATGGG TTGTGAAATG TCAGGTTCAC GCTGGTGGTC GCGGTAAAGC AGGTGGCGTT 
AAGCTTGTTA AAAACAAAGA TGAAATCAAG GCATTTGCTC AAAAATGGCT TGGTCAAAAT 
TTGGTGACTT ATCAGACAGA TGAAGCTGGG CAACCAGTAA GCAAAATCTT GGTTGAAAGC 
TGTACAGATA TTGCTCAAGA ATTGTACCTA GGTGCAGTTG TTGACCGTGC TTCTCGTCGC 
GTAGTTTTCA TGGCATCTAC CGAAGGTGGT GTTGAAATTG AGACCGTTGC TGAAGAAACA 
CCTGAAAAAA TTCTTAAGGC TGAGATCGAT CCTCTAGTAG GTGCTCAACC TTACCAAGCT 
CGCGAAATCG CGTTTAAACT TGGTCTTAAA GGCGTTCAAA TCAAACAGTT TACTCAAATC 
TTCATGGGTT TGGCTAAATT GTTCGAAGAA AAAGACATTG CACTAATCGA AGTAAACCCG 
CTTGTTATTA AAGACGACGG TAACCTTCAT TGTCTTGACG CGAAAGTAGC GATGGACAGC 
AACGCTGCAT ATCGTCAGCC TAAGCTTCAA GAAATGCACG ATCCTTCACA GGAAGATGCA 
CGTGAAGCAC AAGCGGCTAA GTGGGAACTT AACTACGTAG CACTTGATGG CAACATCGGT 
TGCATGGTTA ATGGTGCAGG CCTAGCAATG GGCACTATGG ACATCGTTAA CTTGCACGGT 
GGCTCACCAG CTAACTTCCT AGATGTTGGC GGCGGTGCAA CCAAAGAGCG TGTTGCTGAA 
GCATTCAAAA TCATCCTTTC TGATTCAAAT GTTGCAGCCG TTTTGGTTAA CATTTTCGGT 
GGTATCGTGC GTTGTGACAT GATCGCTGAA GGTATTATCG GTGCAGTTAA AGAAGTGGGT 
GTAACCATTC CTGTTGTTGT ACGTTTAGAA GGTACAAACG CAGAGCTTGG CCGTGATGTA 
TTGGCTAACT CAGGTTTAGA TATCATCGCC GCTTCTAGCT TAACGGATGC TGCGAAACAA 
GTTGTTAAAG CTGCCGGAGG TGCTGCATGA 

 

Protein sequence

MNLHEYQGKQ LFAEYGLPVS EGYAAETPQA AVEAADRIGG TEWVVKCQVH AGGRGKAGGV 
KLVKNKDEIK AFAQKWLGQN LVTYQTDEAG QPVSKILVES CTDIAQELYL GAVVDRASRR 
VVFMASTEGG VEIETVAEET PEKILKAEID PLVGAQPYQA REIAFKLGLK GVQIKQFTQI 
FMGLAKLFEE KDIALIEVNP LVIKDDGNLH CLDAKVAMDS NAAYRQPKLQ EMHDPSQEDA 
REAQAAKWEL NYVALDGNIG CMVNGAGLAM GTMDIVNLHG GSPANFLDVG GGATKERVAE 
AFKIILSDSN VAAVLVNIFG GIVRCDMIAE GIIGAVKEVG VTIPVVVRLE GTNAELGRDV 
LANSGLDIIA ASSLTDAAKQ VVKAAGGAA