| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1799 |
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| Symbol | sucA |
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| ID | 4172047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2158344 |
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| End bp | 2161166 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054809 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_661374 |
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| Protein GI | 109898119 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.243197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACAAA GCGTGATGAA AGCATGGTGG GATTCTTCTC ACATGGCTGG TGGCAACGCT
GCTTATGTAG AAGAACTATA CGAAGCATAT CTTGAAGACG CGAAAAGCGT ATCTGACGAA
TGGCGTGCTA TTTTCGACAA ATTACCTAAG GTCGAAGGAG CTGAACTTGA GACTAAGCAC
AGTGAAATTC GTGACCAATT TCGAGCATTA GCTGCACTGG GTCCTGTTGC TCGAGCAGGG
ACTGTTTCTA CTGGTACATC TCATGCCAGC GATGAGAAAC AAGTTAAAGT TTTACAGCTT
ATTAATGCAT ACCGTTTTCG CGGTCACCAG CACGCAAATC TTGATCCATT AGAACTTTGG
AAACAACCCA GAGTTCGCGA TCTTGAATTG TCGCATCACT CGTTATCAGA AAAAGATTTC
GACACTGTAT ATAATGTCGG CTCTTACGCC ATAGGCCAAG ACAGTATGAA ATTAGGTGAT
TTGTTCAAAT CACTTAACCG TACTTATTGT GGCTCAATTG GTACTGAGTA CATGCACATT
ACCGATACAG AACAAAAGCG CTGGTTACAA GATAGAATTG AATCTGTACA AGCTAAACCT
GAAATTTCTC GAGATGAGAA GGTCGCCATT CTTAAAGGCC TAATTTCTGC TGATGGCATG
GAGAAATACC TAGGGGCTAA ATTCCCAGGA GCTAAACGTT TCTCTCTTGA AGGCGGTGAC
GCATTAGTGC CTATGCTCAA AGGCTTGATT AGTCATGCTG GCGAATGTGG CACGAAAGAA
GTGGTTGTCG GTATGGCTCA CCGAGGACGT ATTAACGTTC TTGTTAACGT ACTAGGCAAA
AACCCGTCGG TTTTATTTGA TGAATTCTCT GGTAAGCACG ACAACACTTT AGGTGCTGGC
GATGTTAAAT ACCATGCTGG CTACTCGTCA GATTACGCTA CCCCAGGCGG CAACGTGCAT
TTAGCACTTG CTTTCAACCC GTCTCATTTA GAAATTGTTA ATCCAGTGGT TATCGGCTCG
GTGCGCGCGC GTCTAGATCG CAGAAACTGT GAAGATGGCT CTGTGGTATT ACCGATTACT
ATTCATGGTG ATTCCGCTAT TGCTGGTCAG GGTGTAGTGC AAGAGACATT TAACATGTCT
CAAACACGTG GTTTCAAAGT GGGCGGTACG GTTCGCATCG TTATCAACAA CCAAGTTGGT
TTCACCACAT CCAATACGGA AGATACGCGT TCAACTCAAT ACTGTACTGA TATTGCTAAA
ATGGTACAGG CGCCTATCTT CCACGTAAAT TCAGATGATC CTGAAGCCGT TATGTTTGTG
ACTAAGCTAG CCCTTGATTA TCGTAATAAA TTTAAACGCG ACGTGGTAAT TGATTTAGTC
TGTTACCGCC GTCACGGACA CAACGAAGCC GATGAGCCGA GTGCGACACA GCCGTTGATG
TACAAGAAGA TTAAAAAGCA CGCTGTTCCT CGTCAGCTTT ATGCCGAGCA ATTGCTAGCC
GAAGGCTCTA TTGAATCTCA TGAAATAGAC AAGTTAGTAT CTGATTATCG CGCAGCACTT
GATCACGGAG CTTGTGTGGT AGAAGAGTGG CGCCCAATGA CTGAGCATTC AGTGGATTGG
ACTCCGTATC TTGGCCACGA CTGGACTGCA CCTTATGAGG GGCAAATCAG TGTAGAGAAG
CTTAAAGATC TCGGCGATAA GTTATGTACT TATCCAGAAG ATCACAAGTT ACAATCTCGC
GTAGCCAAGC TATATCAAGA CCGTCGCGCT ATGGTTGCTG GTGAAAAATT ACTTGACTGG
GGAATGGCCG AAAATCTAGC TTACGCCTCT ATCGTTGACC GTGGCTCAAA CATCCGTATG
ACAGGTCAAG ATTCTGGTCG TGGTACCTTC TTCCACCGTC ATGCTGTATT GCATGGTCAA
GGTGATGGCG AAGCGTATAT GCCACTTGCG CATTTACACC CAGAACAGGG GACCATGGAA
ATATACGATT CTGTATTATC AGAAGCGGCT GTGCTGGCCT TTGAATTCGG GTATGCCACG
GCAGAACCAG GTACACTGAC CATTTGGGAA GCTCAATTTG GTGATTTCGC CAACGGTGCT
CAGGTGGTTA TTGACCAATT CCTAAGTTCA GGTGAAGCCA AATGGGGCCG ACTATGCGGT
CTTACTATGC TGCTTCCTCA TGGTTACGAA GGTCAAGGCC CAGAGCATAG CTCGGCACGT
TTAGAGCGTT TCTTACAAAT GTGTGCTGAC CATAACTGGC AGGTGTGCGT ACCATCAACG
CCAGCTCAGG TTTTCAACAT GTTGCGTCGT CAGGCTATTC GCCCGATGCG TAAGCCACTA
ATTGTTATGT CACCTAAATC ATTGTTACGC CATCCATTGG CCGTTTCTTC TCTTGAGGAG
TTGTCGACTG GCGTATTCCA AAACGTGATT GATGAAATTG ACGAAATGGA TGCCTCGAAG
GTGAAGCGCG TCGTGATGTG TTCAGGCAAA GTGTATTATG ACTTACTTGA TCAGCGCCGT
AAGAGTGAGC AGGATGATGT TGCTATTATT CGTATTGAGC AACTCTATCC GTTCCCGCAC
GCTGAAATTG AGCCTATCGT CAATAAGTTC AAACACGTTA CTGATTGGGT TTGGTGTCAA
GAAGAGCCAC AAAACCAAGG TGCTTGGTAT TGTAGTCAAC ACCACTTTTG GTCAGCTATT
CCTAACGGCG CAAAATTAAG CTATGCCGGT CGTAACGCAT CTGCGTCGCC AGCGGTAGGG
TATATTTCTG TTCACAACCA GCAACAAAAA GAGTTGGTTG ATGATGCATT AACTATTAAA
TAA
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| Protein sequence | MQQSVMKAWW DSSHMAGGNA AYVEELYEAY LEDAKSVSDE WRAIFDKLPK VEGAELETKH
SEIRDQFRAL AALGPVARAG TVSTGTSHAS DEKQVKVLQL INAYRFRGHQ HANLDPLELW
KQPRVRDLEL SHHSLSEKDF DTVYNVGSYA IGQDSMKLGD LFKSLNRTYC GSIGTEYMHI
TDTEQKRWLQ DRIESVQAKP EISRDEKVAI LKGLISADGM EKYLGAKFPG AKRFSLEGGD
ALVPMLKGLI SHAGECGTKE VVVGMAHRGR INVLVNVLGK NPSVLFDEFS GKHDNTLGAG
DVKYHAGYSS DYATPGGNVH LALAFNPSHL EIVNPVVIGS VRARLDRRNC EDGSVVLPIT
IHGDSAIAGQ GVVQETFNMS QTRGFKVGGT VRIVINNQVG FTTSNTEDTR STQYCTDIAK
MVQAPIFHVN SDDPEAVMFV TKLALDYRNK FKRDVVIDLV CYRRHGHNEA DEPSATQPLM
YKKIKKHAVP RQLYAEQLLA EGSIESHEID KLVSDYRAAL DHGACVVEEW RPMTEHSVDW
TPYLGHDWTA PYEGQISVEK LKDLGDKLCT YPEDHKLQSR VAKLYQDRRA MVAGEKLLDW
GMAENLAYAS IVDRGSNIRM TGQDSGRGTF FHRHAVLHGQ GDGEAYMPLA HLHPEQGTME
IYDSVLSEAA VLAFEFGYAT AEPGTLTIWE AQFGDFANGA QVVIDQFLSS GEAKWGRLCG
LTMLLPHGYE GQGPEHSSAR LERFLQMCAD HNWQVCVPST PAQVFNMLRR QAIRPMRKPL
IVMSPKSLLR HPLAVSSLEE LSTGVFQNVI DEIDEMDASK VKRVVMCSGK VYYDLLDQRR
KSEQDDVAII RIEQLYPFPH AEIEPIVNKF KHVTDWVWCQ EEPQNQGAWY CSQHHFWSAI
PNGAKLSYAG RNASASPAVG YISVHNQQQK ELVDDALTIK
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