| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1789 |
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| Symbol | |
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| ID | 4172037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2147370 |
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| End bp | 2148311 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054799 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661364 |
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| Protein GI | 109898109 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCGTG CAAAAACGAC TCTAGAGCAA TGGCGAATAC TGCAAGCCGT TGTCGATCAC
GGTGGCTATG CTCACGCGGC GGCTCATTTA AATAAAAGCC AGTCGTCCTT GAATCATGCG
GTTGCTAAGC TTCAAGACCA ACTTGATGTA AAGCTGCTTG AGGTTAAAGG GCGAAAAGCA
TTCCTCACCG AAGCCGGTGA AGTCATGCTG CGTCGCTCTC GCCATCTAAC GCAAAACGTG
CAAGATTTAG AAGAATTAGC CGCGAACATC AACCAAGATT GGGAGCCCGA AATTACCATT
GCTGTTGACT TAGCCTACCC AAAGAAGCTC CTTTATCCGG CATTGAAAAC ATTTTATCCT
GAAAGCCGAG GCAGCCGGTT ACGCATTATC GAAACAGTAT TAACCGGTAC AGAGGAAGCG
ATTACCGAGG GCTGGGCTGA CATAGTGATA TCACCACTAA TGCCCAGAGG TTTTTTAGGT
GAGCCGATTG CGGAATGTTT ATTACATCCC GTTTGTCACC CCGAACATCA ACTTGCAGCA
CTAGATGGCC CCGTCGAATT AAATGACTTA CAGCAACACC TTCAACTCGT TATTAAAGAT
ACATCCAACA CCCCAAGCGA AAAACAAGGC TGGTTAAAAT CAGAACAGCG TTGGACAGTC
AGCACCTTTG AAACGGCAAT TGATTTATTG TTGCAAAATA TTGGCTTTTG CTGGCTACCA
GATTTTATCA TCGAAGATTT AATTGCTTCG AATTCGCTTC ACCGTTTGCC CATAAAAGGC
AGTAGCTTAC GCCCGCTGAT TTGTTATGTG GTTAAACCTA AACCAGACTC TTGTGGGCCT
GGCACACAGT TGCTTTATCA AACACTGATT CAACAAAGCA CCTTTAATAG CTTTTACAAT
AGCTCGCTCA GTGACTCTTA CACTAACTCG TATAAAGAAT AA
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| Protein sequence | MYRAKTTLEQ WRILQAVVDH GGYAHAAAHL NKSQSSLNHA VAKLQDQLDV KLLEVKGRKA
FLTEAGEVML RRSRHLTQNV QDLEELAANI NQDWEPEITI AVDLAYPKKL LYPALKTFYP
ESRGSRLRII ETVLTGTEEA ITEGWADIVI SPLMPRGFLG EPIAECLLHP VCHPEHQLAA
LDGPVELNDL QQHLQLVIKD TSNTPSEKQG WLKSEQRWTV STFETAIDLL LQNIGFCWLP
DFIIEDLIAS NSLHRLPIKG SSLRPLICYV VKPKPDSCGP GTQLLYQTLI QQSTFNSFYN
SSLSDSYTNS YKE
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