| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1781 |
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| Symbol | |
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| ID | 4172029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2140915 |
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| End bp | 2141832 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054791 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | YP_661356 |
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| Protein GI | 109898101 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.168745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCATTGA CTGTGCTCTT CTGGCTGATT TCTAAGGCCA GAAGATGGGC GTTTTTGACT
GGCTTGAAAA GCTCAGTCAA GGTGTCTGCG CCAGTGATTA TCGTGGGTAA TATCAGCGTG
GGGGGCAACG GTAAAACACC TCTTGTTGTG CATTTAGCCC AGTTTCTACA GGCAAATGGG
TATCGGCCTG GGGTCCTTAG CAGAGGGTAC GGCGGTAATA GCCGTGATTA TCCTTGCGCG
GTGACACGCA ATAGTCAACC AAGCGAAGTT GGAGACGAAC CCGTATTGAT GCGCCAGCGC
ATTCATTGCC CCATGGTGGT TGATCCCCAT CGCGGACGCG GCGCCCAGTG TTTAGTCGAA
GAGCACGATT GTGACGTCAT AATTTGTGAT GACGGCTTGC AGCATTATGC GCTGCAACGA
GATATTGAAA TTGTGGTGAT GGACGCCAAA CGGCGTACCG GAAACCATTT TTTGCTGCCA
TCTGGGCCGC TGAGAGAATC TACCGCTCGC TTAGGGCAAG TAGACTTTGT TGTGGTCAAT
GGCCAGAACA CGCAAAGTGG TGAATGGCTA ATGTCATTAG CGCCGAGTGA GTTGGTCAAC
CTGAATAACC CAACTCTGCA CTTAGCGCTA AGTGAGCTGG ATGCTCCGGT TATTGCAGCG
GCCGGTATTG GTCACCCGGA ACGATTTTAT AAATTATTAG AGCGGCACAA GGTAAAGCTT
AAAAGCTGTT TGAGTTTTGT GGATCACCAC GCGTTTCAAG CAAGTGATTT GCCTAAAGAG
CGGGTGCTGA TGACAGAGAA AGACGCGGTT AAATGCCGAG CATTCGCCCA CGATGATTGG
TGGTATTTAC CGGTGGATGC CAATCTTGAT AGCGAGTTTG AACAACAATT ATTAATGAAA
TTACGCAACG TAAAGTGA
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| Protein sequence | MPLTVLFWLI SKARRWAFLT GLKSSVKVSA PVIIVGNISV GGNGKTPLVV HLAQFLQANG
YRPGVLSRGY GGNSRDYPCA VTRNSQPSEV GDEPVLMRQR IHCPMVVDPH RGRGAQCLVE
EHDCDVIICD DGLQHYALQR DIEIVVMDAK RRTGNHFLLP SGPLRESTAR LGQVDFVVVN
GQNTQSGEWL MSLAPSELVN LNNPTLHLAL SELDAPVIAA AGIGHPERFY KLLERHKVKL
KSCLSFVDHH AFQASDLPKE RVLMTEKDAV KCRAFAHDDW WYLPVDANLD SEFEQQLLMK
LRNVK
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