| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1759 |
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| Symbol | |
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| ID | 4173688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2110518 |
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| End bp | 2115323 |
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| Gene Length | 4806 bp |
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| Protein Length | 1601 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054769 |
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| Product | hypothetical protein |
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| Protein accession | YP_661334 |
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| Protein GI | 109898079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGAAA AATCGGTGGC GCAGAATACC CCATCCCCGT CTAAAACGCC AAAAAGACGC
CTATTTTTGT TGTTTATTAT TCTGCTTTGT GCGGCGGGGT TATATACCTA TTTGTACTAC
AGCAACATCG AAGAAGGCTC AAGTAACAAC AATCTGTACC GGATCCTGTA CGAAGCATCC
AATACGCTAA ACGAAAATCT AGATAAAATT AAACGCGCTC ATGATTATAG CGAAAGTGAA
ACCTCGATAC GCTCCCTTAT GCCGAGCTAT CAACGCACAT CCGACAACTT AACCAGAGAA
ACGGCAACAA CGCTGCTTTA CCAATTATCG GCGCAGCAAA TTCACATTAA AGATGTTAGT
GAAACAGCCA CCGCAAGTAC ACTAGAAACG AAAGCCCCCG AAGAAACCTC CCCTTCAAGC
AACAGTGAGT TTGATGCGAG CGACGTCTCC CCAGCGACTA AAATCGAACC AGGAATACAA
GCTCAAGGGA AAATTACAGA CTCAAACGCC TTGGGCGATA GCGCAAACGT GAGTGACAAC
GCCATATCTG CAACTGGCAC AGATAGCGAG CAACTTCCAG AAACGGCACC AAAATTACAA
AAAAAGTTTA GCGCAACTTT AGATGTAGAG GATATTCTGC CTACCCCCCA AGCAGGTTTT
AGCCAATATT TATTTGCCAG TAAAGAAGGA GAAGTACTCG CCTCGGTGGG TCATGAAAAA
ACCATATCCA TTGTTGATTT AACCAGCATT AACCGTGCCT TTTTACGCCA AGAATCGCGC
TCTTTGTTGT CCATGGCTGA AGAGGCTGAT ATTAAAGGCA AAGTCCCTTT GCCAAGTTAC
AGTAGCCATA TCGATATCAC TTTGTCTTAT GGAAAATATC GCGTATTTGC TTTCCCTTTC
GCACTAGACA TTCCTTTGCA GTATGAGCAC GAGGGTGAAA CCAACACCTT AAATCATCTG
TATCTCATTG GGCTAATGCC CAGAGCCAAA CTAATCCAAC AAAGCACAAC CAGTTGGAAT
GCGTCATTAT TGGTCGTCAG CATTGTGAGT CTGCTATTTA TGTTGGCCCT CGTGCGTTTG
TTTCTGTTGC CGGTTACCCA TTCGATCACC CCAGCCACGC GTAATCTCAC CCACCTCATC
AGTTACGCTT TCTTTATCGT GGTTTTGTCT TTGCTTTTGG CTTATTTACA AAAGTACGTT
GTACGCTACG ACAAAGACCT GCGGGCCATG GACTATGGCT CAACAATCGC CCAAGAAATG
GAGCACGACG TCTACGAAGT ATTTAACAAA CTCGCCCAGT ACCGTACTTT TTACCAAATC
CTGCAAAAAA GCACAGATAC ACACAAAAAT GACGGCCAAA CGCGAGCACG TGATAAGCGA
CAAACTCAGC TCGACTTATT AGACAATTTT CATCAGGGGT TACTGAGTAT CACAGATAAC
CCGTGCCTCA ACGTTGAAGA TCACAAACTC GCGCCAGATG AGCTTAAACG TGCTCAAGCC
GAGCATGGTG CAAGCAATAA AGCGCCGCCC AATTTCAGCA ATTTACCCAA CGCTGCCGTC
AACGCAAAAA ATCAATTCTT TATTCGTTAC GCCTGCAAAG GTACACAGCT TACAATTGAA
AGCGATCTTC ACAAGGCTAA CTTGTTCGAC TATCTAAACG ATGATGACAC CTTGCCAGAC
GACGCGCAGA TCATCGACTT TTTCGCACAA AATTTAGCTC TGGAACACTT TCCCGATGAA
AGTCTAGACA CATACGTTGC CTCATCACCG CAAGCAAATC CCCCGCTAAA AATACTCAAT
ATTTTTCTGC TCAACAAAGA TGGCTTTATT TTGACACCGT CCTTTTACTT TGTTGAAAAC
AATGTATTAC CTGCAGGATT TGAGTTATCT AACCGAGACT ATTTCAAAAA AATTCGCGAT
CAAAAAGGCT GGCGATTACC CCCTAAAAAT GACGATACTC TTCAATCTAA TGGATACAAC
CAAGTCTTCA TTCAGCGCCT GCTCAACGTC AATAATGCGA CCCGTGGCAC CACCATCTCG
ATGCCGCTGC ACGATGGCAG CAATACAGGC ATTCACAGTC ACGCCAGTGG GTATAACGTC
CAAAGCGAGC CCAGCAATAA ACGCTATGCC GATGTGATTG CCGCCGATGT ATTGCTACCC
AGTATTAGCC TAGCCAAACC GGCCCCAATG GACATGACGT TCATGGTGGT CGACAGAGAT
AACGGTGACG TATTATTTCA CAGTGACGCT AGCCGCTCCT TAGTGGAAAA CCTTTATTAT
TCAGGTAATC ACAGCCCTGT ACTCAGCCAA CGGATCCGCG CAGCACTGGA CAATACGGAT
GCTGAAAATT CAACGGTTAA CCAAGCAATC GATGGGTTTT ATCACGGCCA AGCAGGCCGC
TTTTTTGTAC GACCCAGTGT GATTGATCAG TGGGCGGTGG TGGTGTTTTA CCCCAACGAC
AGCCTAGATG CGCTGATGAC AAGTCAGTTT ATGTTTCTGT GCATTAGTTT TGCCGTATTT
GTGACGTTCT TAACATGCAC GAGTTGGTTG CTTGGCCGAC TATTCGATAC CGATAGACTC
AAGCAAGTAG TGAATTTACC CGCCACCTTT GATACCAAAG AAATGCTGCA TATAAGCTCC
ACGCTCATTG GCATCATGTA CTGCCTTTTC ACGTTTACCC ACCTCGCTAT TTATCCGCAA
GAGAGTGCTG GATATTGGGT GACATTTATC GCCATTGGTA CCCTACTGGT CATATTTTAT
TTTGGTTACC GTGGGTACAA GTTACTTTTT GAATCCGCAG GAGAAAGTTT CTCTATTCAT
GGTAAGGGAA CAAAAGGTGC TGTCTTTCTA GCGTTAGGGT TAGGCGCTCT CGCTCTAGTA
CAAGCACTAT ACCTTAAGTC CGTCATGACG ATCCCGCTGA AAAATTTAGC GCATTATTAT
CAATATCAAG ATTGCAATAA GCTGAATCGA GAGCGAGCAG AAATTGCCGC TTTAGGTCTC
ACGCGTTTTC CAAATTCTAT TACCAAGCAT CGTATGAAAG CCGCGGCTTT ATTGAAAGGT
AGTGGCGAGA GCAACAAGCC AATGACACAG CAAACAAACA TGCGCAGTTT AAAGAAACAG
TGTGAACACT ACTCCACTGC TGTAACCCCA AACGACTTCC CTAATGCGCT GGATTTGATA
AGCGCGACTC AAGATTGGCC TTGGTTAGAC TCCTTTATTG CTTTTTCGCA CACACCTGAG
ATGAACGAAC CTCACGAGCA GATTGATGAA GGAAAATCCA ACGAAACGCA ATATACCGAA
GACGACGTTG CTACAACAGG TGGCGAAACC ATTAAAAGCG CTTACGATCG TTTAGCGAAT
TATGATCTCA CTATGCCCGT TTGGGCAATG ATATTAGGGG TCATTGCGAT TACGCTGATG
CTGATCGCCT GGCTTCACTT TAATCGAGTG ACGTTGTGGC AAAGATTGTA TTACTCGTCG
TTTTTCTTAC GACACATACG TGGCCTAAAT TTACCCATGC GCAATGAGGA CTGTGAGCAA
ATTTCACCGC ATTTAACGCT CAAGGTAGAC TCAGCCAAGC CTAACGGTAT TGATCTAACC
ACGTTGCTTC ACTTAACACC GCTAACAGAA GAAGGCGCAG TGTCTAAGCC GCATATAATA
CTTCAAGAAA CACAACAGAA GACAGAACAA AAAAACCAAG GCAAAGAGAC AACAGGGGCA
CAGTCATTGG CCTGCTTTGC TTTATTACTG CAAAACAGTC CATGTTTGCA ACATTTTAAG
CAAGAAAAAG TCGATTTACC CAATGTGAAA ATGGTGCTGC ACATCGGCCC TGAAATGACG
GGGTTCGCTA TCGAAATGTG GGATATTGAG GTGTGTTTAG AAGTCCCCAA ACTCAGGAAT
GAGCTACTGG GTTTACTCAT GGAGCTTAAA TCACTGGTGC TGCTCGGTAA AATTGAAAGC
TTAACCCTGT ACGCTGGTTT CTATAGTTTG CAACGAGTTA AAATGAAAGA TCCCCTAGGT
CAGGTAAACG ATACAGCCAA ATTAGCCCAC GCTGATTACT TATCTTGGGC TGACTGTTTG
CTGGATTTCA ATGTCATCTT ACCGGCGAAA ATCACTCAGC AAATCGACCA AGACGTACTA
CACGACGAAA TAGACATGTT CAGAGATTTA GCCTGCTTGT TCGCTATAAC AGAGCCGCGT
GCTGTGCCCA CTGATGAACT GGTACTTCCT CTTAAAGGGC CCAATTTTAG CTCGGTTTCC
AGAGCACTCA ACTGGTTCGC TAAAGAGAAC CTGCATCGGG TATACGACAA CGTAAAACAA
CCGCCTAGCA AGCTCTACAG TACCCGATAT TGGGCCACCA TTAATTACAT ATTGTTAAAA
GCAGGGGCAT TGTATCGCTA CAAGTGGGAG TTATGCTCCA ACGCTGAAAA ACTCGCTTTA
TACAATCTTG CAAAAGGGCA ATATATCAAC CCTAAAAATA GCGAAATGAT AGAGCACCTC
GCGTTAGCGG GCTTAATAAA AGTTGAACGC CGGCATGTGG CTATTATCAA TCAAAGCTTT
GCGCATTTTG TGTTACATGC TGAAAGCCCA GAATCCATGA GTCAGTTAGT GAATGACGGA
GAAGCAGGCA CATGGAAAAG CTATAGAGTA CCGCTAGGCT TGTTGTTGGT CTTAGTCATA
GGTGCTGTCG CTCTTACCTC TGGTCAGTCG CTGTACATCA TCGCCGCTTC ATTAGCGGGG
GTGATTGGTA CCATTGCCAG TTTAACCACC AGCGCCAATA TGCTGCGGGG GCACTTACGG
GAGTAA
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| Protein sequence | MSEKSVAQNT PSPSKTPKRR LFLLFIILLC AAGLYTYLYY SNIEEGSSNN NLYRILYEAS
NTLNENLDKI KRAHDYSESE TSIRSLMPSY QRTSDNLTRE TATTLLYQLS AQQIHIKDVS
ETATASTLET KAPEETSPSS NSEFDASDVS PATKIEPGIQ AQGKITDSNA LGDSANVSDN
AISATGTDSE QLPETAPKLQ KKFSATLDVE DILPTPQAGF SQYLFASKEG EVLASVGHEK
TISIVDLTSI NRAFLRQESR SLLSMAEEAD IKGKVPLPSY SSHIDITLSY GKYRVFAFPF
ALDIPLQYEH EGETNTLNHL YLIGLMPRAK LIQQSTTSWN ASLLVVSIVS LLFMLALVRL
FLLPVTHSIT PATRNLTHLI SYAFFIVVLS LLLAYLQKYV VRYDKDLRAM DYGSTIAQEM
EHDVYEVFNK LAQYRTFYQI LQKSTDTHKN DGQTRARDKR QTQLDLLDNF HQGLLSITDN
PCLNVEDHKL APDELKRAQA EHGASNKAPP NFSNLPNAAV NAKNQFFIRY ACKGTQLTIE
SDLHKANLFD YLNDDDTLPD DAQIIDFFAQ NLALEHFPDE SLDTYVASSP QANPPLKILN
IFLLNKDGFI LTPSFYFVEN NVLPAGFELS NRDYFKKIRD QKGWRLPPKN DDTLQSNGYN
QVFIQRLLNV NNATRGTTIS MPLHDGSNTG IHSHASGYNV QSEPSNKRYA DVIAADVLLP
SISLAKPAPM DMTFMVVDRD NGDVLFHSDA SRSLVENLYY SGNHSPVLSQ RIRAALDNTD
AENSTVNQAI DGFYHGQAGR FFVRPSVIDQ WAVVVFYPND SLDALMTSQF MFLCISFAVF
VTFLTCTSWL LGRLFDTDRL KQVVNLPATF DTKEMLHISS TLIGIMYCLF TFTHLAIYPQ
ESAGYWVTFI AIGTLLVIFY FGYRGYKLLF ESAGESFSIH GKGTKGAVFL ALGLGALALV
QALYLKSVMT IPLKNLAHYY QYQDCNKLNR ERAEIAALGL TRFPNSITKH RMKAAALLKG
SGESNKPMTQ QTNMRSLKKQ CEHYSTAVTP NDFPNALDLI SATQDWPWLD SFIAFSHTPE
MNEPHEQIDE GKSNETQYTE DDVATTGGET IKSAYDRLAN YDLTMPVWAM ILGVIAITLM
LIAWLHFNRV TLWQRLYYSS FFLRHIRGLN LPMRNEDCEQ ISPHLTLKVD SAKPNGIDLT
TLLHLTPLTE EGAVSKPHII LQETQQKTEQ KNQGKETTGA QSLACFALLL QNSPCLQHFK
QEKVDLPNVK MVLHIGPEMT GFAIEMWDIE VCLEVPKLRN ELLGLLMELK SLVLLGKIES
LTLYAGFYSL QRVKMKDPLG QVNDTAKLAH ADYLSWADCL LDFNVILPAK ITQQIDQDVL
HDEIDMFRDL ACLFAITEPR AVPTDELVLP LKGPNFSSVS RALNWFAKEN LHRVYDNVKQ
PPSKLYSTRY WATINYILLK AGALYRYKWE LCSNAEKLAL YNLAKGQYIN PKNSEMIEHL
ALAGLIKVER RHVAIINQSF AHFVLHAESP ESMSQLVNDG EAGTWKSYRV PLGLLLVLVI
GAVALTSGQS LYIIAASLAG VIGTIASLTT SANMLRGHLR E
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