| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1739 |
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| Symbol | smpB |
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| ID | 4173668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2079646 |
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| End bp | 2080122 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054749 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_661314 |
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| Protein GI | 109898059 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCAA AGAAGTCAAA ATCAACTAAC AACACCATCG CATTGAATAA AAAGGCGCGG
CACGACTATA TCTTGCAAGA TAAAATCGAA GCTGGCATTG AATTACAAGG ATGGGAAGTT
AAAAGCATTC GTTCAGGCAA AGTCAATTTG TCTGACAGCT ACGTTACCTT ACACAAAGGC
GAAGCCTTTT TAGTGGGTAG TACTATTCAA CCTCTTAACC AAGCATCAAG CCACGTAGTA
TGTGAGCCTT TGCGTCAGCG TAAACTCTTA CTCAACAAAC GTGAGCTCGA CAAACTGATA
GGCTCAGTCG AGCGCCAAGG GTACTCAATT TTAGCCACCG CCATGTACTG GAAGAAAAAC
TGGGTAAAAG TAGAAATTTA CTTAGGTAAA GGTAAGCACG AGCATGATAA ACGTGATGCC
GTGAAAGACC GAGATTGGGC GAGAGACAAA GAACGCATGA TGAAGCATAA AGTCTAG
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| Protein sequence | MKSKKSKSTN NTIALNKKAR HDYILQDKIE AGIELQGWEV KSIRSGKVNL SDSYVTLHKG
EAFLVGSTIQ PLNQASSHVV CEPLRQRKLL LNKRELDKLI GSVERQGYSI LATAMYWKKN
WVKVEIYLGK GKHEHDKRDA VKDRDWARDK ERMMKHKV
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