| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1685 |
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| Symbol | |
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| ID | 4172276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2014905 |
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| End bp | 2015672 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054694 |
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| Product | class II aldolase/adducin-like |
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| Protein accession | YP_661260 |
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| Protein GI | 109898005 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTGCGT TATCAGATAG AAGTTTAAAA GGGCAAGTGT CCGATGCTGA GTGGCAAACT
CGCGTTGATC TAGCTGCATG TTACAGACTC GTGGCAGACG CTCGCTGGGG CGACCTTATT
TATACCCATA TTTCTGCGCG TGTTCCCGGT ACAGATGAGT ATTTGATTAA TCCTTTTGGG
TTAACATTTG AAGAAGTCAC CGCCTCGAAC CTAGTGAAAG TGGATTTAGA AGGCAATATC
CTAGATGGTT CGCCGTATAC TATTAATCCT GCTGGTTTTA CCATTCATAG CGCTATTCAT
GAAGTAAGAC ATGATGCGCA ATGCGTCATT CATTTGCATA CCAAAGCGAC GATCAGCGTT
GCCAGCCTAA AAGATGGTTT GCAACCATGG AGCCAATACG CGATGTTCTC CTTGTCGTCC
ATGAGCTACC ACGAATATGA AGGTCTGGCG GTGAATGCCG ATGAGAAAAG GCGCCTGCAA
GATGATTTAG CTAACAACAA CCATATGCTT TTACATAATC ATGGCGGTTT GACATTGGGC
CCAACGGTGG GGGATGCCTT TATGCGCTTT TATGATTTGC AGCGCGCATG TGAGATTCAG
ATGGATTTAC TACAAGCAAA TCAATCGGTT ATTGAAATTC CACAGGCCAT AGTCGATGGC
ATATATGCTC AAGCTAATGT GGTTCACAGT GGGCAAACCG GCGGCCAAAA AGCCTGGCCA
GCCATGTTAC GTAAAGCTTA CAAGCTCGAT CCGAGTTTTT GCGAATAA
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| Protein sequence | MFALSDRSLK GQVSDAEWQT RVDLAACYRL VADARWGDLI YTHISARVPG TDEYLINPFG
LTFEEVTASN LVKVDLEGNI LDGSPYTINP AGFTIHSAIH EVRHDAQCVI HLHTKATISV
ASLKDGLQPW SQYAMFSLSS MSYHEYEGLA VNADEKRRLQ DDLANNNHML LHNHGGLTLG
PTVGDAFMRF YDLQRACEIQ MDLLQANQSV IEIPQAIVDG IYAQANVVHS GQTGGQKAWP
AMLRKAYKLD PSFCE
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