| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1663 |
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| Symbol | fadI |
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| ID | 4172254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1981222 |
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| End bp | 1982532 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054673 |
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| Product | 3-ketoacyl-CoA thiolase |
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| Protein accession | YP_661239 |
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| Protein GI | 109897984 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases
[TIGR02446] fatty oxidation complex, beta subunit FadI |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0806954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCAA AGCAAACAGT TACGACTCGA GATGGAGAGC GCATCGCTAT CGTAGCGGGA
CTACGAACAC CATTCGCTAA AATGGCGACG AATTTTCACG GCGTTCCTGC TGTTGATTTA
GGCAAAATGG TAGTGAATGA GATGTTGGTT AAGCACAATG TGGACCCGCT ACTTATCGAG
CAATTGGTCT ATGGTCAAGT CGTGCAGATG CCAGAAGCCC CTAATATCGC ACGTGAAATA
GTGCTTGGCA CAGGCATGAG TGTGCATACC GACGCTTACA GCGTGTCTAG GGCGTGTGCG
ACGAGCTTCC AGTCTACGGT GAATATTGCG GAATCGATGA TGCTGGGTAA TATCAGTGTC
GGCATTGCTG GGGGCGCTGA TTCTACGTCT GTGTCTCCCA TTGGCGTTTC CAAAAACCTA
GCACGGGCTT TGACAGATCT GCAAAAAACC AAAACCTTAG GCCAAAAATT CAATGTTCTT
AAAAAGCTAG GTCTAAAAGA TTTGTTACCG GTTCCACCTG CAGTTGCAGA GTATTCAACT
GGGTTGTCCA TGGGACAAAC TGCTGAGCAA ATGGCCAAGA GTCATAGTAT TAGCCGGGCA
GACCAAGATA AGCTCGCACA CCGTTCGCAT TCTTTAGCAG CGCAGAGCTG GAATGAAGGT
AAATTAGCTG GCGAAGTGAT GACCGCTTAC CCTGCGCCAT ACAAAAGCGC ATTTGAAAAA
GACAACAACA TCCGCTTTGA TTCAAAATTA GAAGGCTATG CCAAACTTCG CCCTGTGTTT
GATAAGAAGC ACGGTACTGT CACCGCGGCG AACGCTACTC CATTGACTGA TGGTGCTTCA
GCCGTGTTGA TGATGACAGA AAGCCGTGCA AAAGCACTGG GTTACACCCC TCTTGGTTAC
ATTAAGAGTT ATGCGTTTGC CGCTATCGAT GTGTGGGAAG ATATGTTAAT GGGGCCGTCG
TATGCCACGC CTATGGCGTT AGATAGGGCG GGTATGACAT TAAACGACCT AACCTTAATT
GAAATGCACG AAGCGTTTGC GGCGCAAACA TTGGCGAATA TCAAAATGTT TGCTAGTGAT
AAATTTGCCC AAGAAAAGCT CGGTCGTAGT AAAGCCACAG GCGAAATTGA TATGGCTAAA
TTCAATGTTA TGGGAAGTTC ACTTGCCTAT GGGCATCCAT TTGCAGCGAC GGGCACACGT
ATGATCACCC AAATGTTAAA TGAATTAAAT CGACGTGGAG GCGGCAGTGG ATTACTCACC
GCTTGCGCCG CTGGCGGTCT GGCCGCAGCA ATGATCGTTG AAACAGAATA A
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| Protein sequence | MTAKQTVTTR DGERIAIVAG LRTPFAKMAT NFHGVPAVDL GKMVVNEMLV KHNVDPLLIE
QLVYGQVVQM PEAPNIAREI VLGTGMSVHT DAYSVSRACA TSFQSTVNIA ESMMLGNISV
GIAGGADSTS VSPIGVSKNL ARALTDLQKT KTLGQKFNVL KKLGLKDLLP VPPAVAEYST
GLSMGQTAEQ MAKSHSISRA DQDKLAHRSH SLAAQSWNEG KLAGEVMTAY PAPYKSAFEK
DNNIRFDSKL EGYAKLRPVF DKKHGTVTAA NATPLTDGAS AVLMMTESRA KALGYTPLGY
IKSYAFAAID VWEDMLMGPS YATPMALDRA GMTLNDLTLI EMHEAFAAQT LANIKMFASD
KFAQEKLGRS KATGEIDMAK FNVMGSSLAY GHPFAATGTR MITQMLNELN RRGGGSGLLT
ACAAGGLAAA MIVETE
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