Gene Patl_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1610 
Symbol 
ID4173864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1915888 
End bp1916487 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content46% 
IMG OID638054620 
Producthypothetical protein 
Protein accessionYP_661186 
Protein GI109897931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.843769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTGA ATCACCTGTG GGGGTTGTAT GCCCATCCTA AAGAAGAATG GCACAGCATT 
GATGACCGTC ACGAAACCTA TTTTTACAGC TTAAGTCACA TCGCCCTAAT ATCTCTTATT 
CCCGCTTTAA TGACCTACTA CTCTACCGCG TATTTGGGTT GGAGCATTGG TGTTGGCGAC 
ACAATCAAAC TCACTAAAGA AAGCGCTGCT ATTATGAGCG CCGGTACCTA CTTAGGCTTA 
GTGGTCGGCG TTCTAGCCTT ATCTGTGCTA ATTCACGAGC TGGCCAAAGC GTTCGACTCG 
ACACCCACTT ATACCCAGTC ACTTGAACTC GCAGCTTACA CGGCAACCCC GTTATTTATG 
GTAGGTTTTG CGGCATTTTA CCCTGTTTTA TGGTTTGTCA TGATGATCGG TTTAGTGGGC 
CTCACCTACT CGGTGTATTT ACTTTACACC GGCACGCCTA TTCTTATGCA CATCCCTGAA 
GAGAAAGGCT TTATTTATGC GAGCTCTGTG GTGACCTGTG GCCTGGTACT GTTAACTATT 
TTAATGGCTG CTTCGGTGAT TTTGTGGAGC ATGGGCATGG GGCCAGTATT TACTGGTTAA
 
Protein sequence
MILNHLWGLY AHPKEEWHSI DDRHETYFYS LSHIALISLI PALMTYYSTA YLGWSIGVGD 
TIKLTKESAA IMSAGTYLGL VVGVLALSVL IHELAKAFDS TPTYTQSLEL AAYTATPLFM 
VGFAAFYPVL WFVMMIGLVG LTYSVYLLYT GTPILMHIPE EKGFIYASSV VTCGLVLLTI 
LMAASVILWS MGMGPVFTG