| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1609 |
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| Symbol | |
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| ID | 4173863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1914204 |
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| End bp | 1915721 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054619 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_661185 |
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| Protein GI | 109897930 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGTA TTGTCGGAAT CGTAGGTAAA AGTCCAGTAA ACCAGTCCTT GTATGACGGG
CTGACTGTAT TGCAACATCG GGGGCAAGAT GCAGCAGGGA TTGTCACCAT AGACGAGGGT
GTGTTTCATC TGCGTAAAGA CAATGGGTTA GTGCGCGATG TTTTCCACAC GCGTCATATG
AAGCGACTCA CAGGTCAGTT TGGTATTGGT CATGTACGTT ATCCTACAGC CGGCAGTTCT
AGCTCTGCAG AGGCGCAACC TTTCTACGTT AATTCACCTT TTGGTATTGC CTTTGCCCAC
AATGGTAATT TAACCAATGC ACATGAGCTA AAAGATGACG TATTTCGGAT TGCTAAACGC
CATATTAACA CCACGTCTGA CTCTGAATTA TTGCTCAATA TTATTGCGCA TGAACTTCAC
AACTGTGAAG GGTTAAGCCT AACCCCAGAA GAAGTATTCA AAGCGGTGAC CACAGTGCAC
AAAAAAGTGC GTGGTGCATA CGCTGTTGTT GCTGCAATCA TAGGTAACGG CATGCTGGCT
TTTAGAGACC CATTTGGCAT TCGTCCTTTG GCTCTGGGCA AACGCAAAAC TGAATTTGGC
GACGAATACA TGGTGGCCTC TGAAAGTGTT GCATTGGATG CCGTGGGTTT TACGTTTATC
CGTGATGTGG CGCCAGGTGA AGCTATTTAT GTGACCGAAA GCGGCGAATT GCACACCCAA
CAATGTGCGC ATGGGGCAAT TAATGCTCCT TGTATTTTCG AATTCGTTTA TTTTGCCCGC
CCAGATTCTT TTATCGATGG TATTTCGGTT TATGCGTCAC GCGTCAATAT GGGTCGTAAG
CTAGGTCAGA AAATCGCTCG AGAGTGGGCA GATTTGGATA TAGACGTTGT CATTCCTATC
CCAGAAACAT CAACTGATGT CGCCCTACAG ATCTCACTTG AGTTGAACCT GCCATACCGC
CAAGGTTTTG TGAAAAACCG TTACATTGGT CGCACCTTTA TCATGCCTGG GCAAACCATG
CGTCGTAAAT CGGTACGTCG TAAATTGAAT GCCATCCCCT CTGAGTTTGT CGGTAAAAAT
GTATTGCTGG TGGATGACTC GATTGTGCGT GGCACTACCT CAGAGCAGAT CATCGATATG
GCGCGTGAGT CTGGCGCGAA GAAGGTGTAT TTTGCGTCGG CGGCGCCTGA AATTCGTTTC
CCTAATGTGT ACGGTATTGA CATGCCTTCG GTGAACGAAT TGATTGCATA TGGTCGTGAG
ATTGAGGAAA TTAGCGATTT GATCCGAGCC GATGGTTTGA TATTCCAAGA CATCAGCGAC
TTAGTTGAAG CGGTGACTGA ACTTAATCCA GTTATTAATC GCTTTGAAAC GTCGGTCTTT
GATGGAAACT ATATTACAGG TGATGTGGAT CAACATTACT TGGAGCGTAT TGATACATTG
CGTAATGAGG GGGCTAAAAA CGCTGGCATT CAAACTGAGC TAAGCAACCT TGAAATGCAC
AATATGCAGG AAGACTAA
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| Protein sequence | MCGIVGIVGK SPVNQSLYDG LTVLQHRGQD AAGIVTIDEG VFHLRKDNGL VRDVFHTRHM
KRLTGQFGIG HVRYPTAGSS SSAEAQPFYV NSPFGIAFAH NGNLTNAHEL KDDVFRIAKR
HINTTSDSEL LLNIIAHELH NCEGLSLTPE EVFKAVTTVH KKVRGAYAVV AAIIGNGMLA
FRDPFGIRPL ALGKRKTEFG DEYMVASESV ALDAVGFTFI RDVAPGEAIY VTESGELHTQ
QCAHGAINAP CIFEFVYFAR PDSFIDGISV YASRVNMGRK LGQKIAREWA DLDIDVVIPI
PETSTDVALQ ISLELNLPYR QGFVKNRYIG RTFIMPGQTM RRKSVRRKLN AIPSEFVGKN
VLLVDDSIVR GTTSEQIIDM ARESGAKKVY FASAAPEIRF PNVYGIDMPS VNELIAYGRE
IEEISDLIRA DGLIFQDISD LVEAVTELNP VINRFETSVF DGNYITGDVD QHYLERIDTL
RNEGAKNAGI QTELSNLEMH NMQED
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