Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1589 |
Symbol | |
ID | 4173843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1895203 |
End bp | 1895871 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054599 |
Product | hypothetical protein |
Protein accession | YP_661165 |
Protein GI | 109897910 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCAC GTTTACCAAG GTGGGTGGAG TACGGCGCAT TTATATTGGC TATGATAGCT GGTAGTGTCA ATGCTGTAGG ATTGTTAGGC TTTACCCATC AAGCTATATC TCATTTATCA GGCACCGCAA CGCTGATTGG CGCAAGTTTA AGCCATGTGT CGTGGCAAGA ATCGCTTCAC CTTTTCGCTA TTCTGCTCAG CTTTATGCTG GGGGCGGCTT TCTCTGGCTT TTTCTTACGT AATCGTACTC TCAAGTTATC TCGCCACTAT GACTTTTTAC TTTTCACCGA AGGATGCCTT TTATTGCTAT CTATTTGGTT ACTTAGAGAT AATTACGCTG CTGGTCACTA TACTGCGTCA GCTGCATGTG GTTTGCAAAA TGCGCTAGCA ACCACCTACA GCGGAGCCAT TATCCGGACC ACTCACATGA CAGGGATTTT CACCGATTTG GGGATCATGC TAGGCGAACG GTTACGGCAG AAAACCTTTG ATAAACGCAA AATGATATTG TTTTTATTAC TAATCAGCGG CTTTATTAGT GGTGGAGTGA TGGGCACCAG TTTATTTACC TACTTCGGCT TTAACGCGTT GTTAGTGCCG GCATCACTAT GCTTTGCGCT GGCGCTGAGC TATCGCGTTT ATCGCAACAA AATGAAAAGA AGGCGCTAA
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Protein sequence | MISRLPRWVE YGAFILAMIA GSVNAVGLLG FTHQAISHLS GTATLIGASL SHVSWQESLH LFAILLSFML GAAFSGFFLR NRTLKLSRHY DFLLFTEGCL LLLSIWLLRD NYAAGHYTAS AACGLQNALA TTYSGAIIRT THMTGIFTDL GIMLGERLRQ KTFDKRKMIL FLLLISGFIS GGVMGTSLFT YFGFNALLVP ASLCFALALS YRVYRNKMKR RR
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