| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1565 |
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| Symbol | |
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| ID | 4172557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1869264 |
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| End bp | 1869785 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054574 |
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| Product | rare lipoprotein B |
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| Protein accession | YP_661141 |
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| Protein GI | 109897886 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2980] Rare lipoprotein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAACC TCATCATCTG CTTATTCTGT AGCCTTATTA TCAGTGGTTG CGGTTTTTCA
TTGCGTGGTA ATTATGAGCT ACCCGCAAGT GTTTCTCAGT TAAGGGTAGG CTCAAGCGAA
GCACACTCGG CGCTAGAGCG CGCCCTTCGC AATGAACTAA AGCCATACAG TGTTGAGGTG
ATTGACTCTA GTGTGAAAGG CACCTCTAAC ACCTCTAGCA TATACCTGTT GAGTGATGTT
CTTGATAGAC GTTTATTATC GCTTTTCAGC ACAGGTCAAG TCGCTGAGTA TGAATTGATT
TACACCGTTC GCTATGAGCT ACAGTTTGCC AATAGTGATG CTCAATTGCT CGAGTTTGAT
ATTAAGCGAG AGTACCAAGA TGATCCCGAT GCCGTATTGG CAAAATCTCG TGAGCTTGAA
CTGGTGTTAT CTGAAATGCG CAAACAAGCG GCAATCCGTA TCATCCATCA AATATCAATT
GCCCAGCGCA CCATAGCAAA CACGGCACCC ATTAGACCTT AA
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| Protein sequence | MRNLIICLFC SLIISGCGFS LRGNYELPAS VSQLRVGSSE AHSALERALR NELKPYSVEV
IDSSVKGTSN TSSIYLLSDV LDRRLLSLFS TGQVAEYELI YTVRYELQFA NSDAQLLEFD
IKREYQDDPD AVLAKSRELE LVLSEMRKQA AIRIIHQISI AQRTIANTAP IRP
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