| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1535 |
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| Symbol | |
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| ID | 4172984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1840935 |
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| End bp | 1842635 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054544 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_661111 |
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| Protein GI | 109897856 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTGC GTCGAAAAAC AATAATAGGT ATTGCCAGCA TAGAAGCCGT GCTGTTGCTT
TCGTTAATCA TTACCGCCGT GACGTTTTTA AGTCAATCTG TGAACAAAGA CTTGATTAAA
CATGCCTCTA CCACTGCGAC TTTGTTCTCA ACCACCACCA AAGATGCTGT CCTTTCGTAC
GATCTTGCGT CACTGGATGA TTTTGTCTCT GAAGCGCTTA AAAACCCCGG TATAGAATAC
GCTCGAGTCA TTAGTAGCAC TGAGGGCATT TTATCGCAAA AAGGCTCTGC TTCAGCATTG
GCCCGTGCAT TTAACGCCGA TATGCATATG TCCGACGTCA CCGATGGCAT CTTTGACACC
TACGCCGATA TCATTGAAGG GGATACTGTT TATGGTCGCG TGGAAATAGG CATGAGCACA
GAGCAGGCCG TCACTTCTAT CGCCAAAATA AAACAATGGA CCACCTCCAT TGCAGTTGTA
GAGTTAATTC TCGTGGCTTT ATTTTCATAT GCTTTGGGTC ATTATTTAAC CCGCCAACTT
GGTTTGCTAA GGGCTGGGGC GAAAAAGATA TCCTATAGCG TACTCTCGGG TGATTTTAAT
GACACCCGCA TTGCGATAAA AACTAAGGAT GAACTCGGAG AAGTTGCCCA CGCCTTTAAC
CAAATGGTCG AAACCTTAGA AGCGGAATGC GTTCGGGTTA AAAAATATCA AGAAGAACTA
GAGCATCTAA ATCAAACTTT GGAAAAGCGT GTAGTGGCAA GAACGCAACT ACTTGAAGAT
AAAAACGCAC AATTAAGCCT TATCAACTTT GAATTAAAGA GCACACAGGA ACAACTTGTA
CAGGCTGAAA AAATGGCCTC TCTTGGGCAA TTAGCAGCTG GGGTTGCCCA CGAAATAAAT
AATCCAATAG GCTTTGTTAG CAGTAACCTA ACATCTCTTT CAGAGTATGC AGATGTGTAC
GTTAAGCTGG GGCAACATAT CACCGATTGG CAATCGAGCG AAACACCAGA AGACCGCAAA
AAGTACGAAA ACAGCCTAAT TGAATTTATT CAAAGTGAAA ATCTTGCGTT TATGCAAGAA
GACATTCAAG CGTTAATCAA TGAATCGAAT GAAGGCCTAA TACGGGTTAA AGATATCGTA
TCAGGACTGA AACAATTTTC CCGAGCTGAC AGTAAAGAGA GTCAATACTT TGATATCAAT
GACTGTGTTA AAACCACGTT GAGTATGGTC AGCAACGAAC TTAAATACCA CTGTGACATC
GTCACGCACC TGCAAGATGT CCCTCAAGTT AACATCAATG TAGGCAAAAT TTGTCAGGTA
CTAACCAATT TATTCATCAA TGCAGGTCAA GCAATTGGTT CGCAAAATAC TTCCCGACAA
AGTATTGCCC CACAAAGTAT TGCCCCACAA AGTATTGCCC CACAAGGCGT CATCACTATT
GAAACCTATT CTCATCATGA ATTGGTATAT GTGGTGGTCA GTGATACTGG TCATGGTATT
CCAGCTGAGA ATCTAAAGCG CCTGTTTGAC CCTTTCTTTA CCACTAAGCC AGAAGGGCAA
GGCACGGGAC TTGGTTTGGC TATTTCTTTT GGTATTGCCC AAGAACATGG TGGCGATCTG
AGCGTGTTCA GCGAAGAACA CAAAGGCAGT CGCTTTACCT TAAGCTTGCC CGTAACCACT
TTACCCACAG AAACCGTCTA A
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| Protein sequence | MSLRRKTIIG IASIEAVLLL SLIITAVTFL SQSVNKDLIK HASTTATLFS TTTKDAVLSY
DLASLDDFVS EALKNPGIEY ARVISSTEGI LSQKGSASAL ARAFNADMHM SDVTDGIFDT
YADIIEGDTV YGRVEIGMST EQAVTSIAKI KQWTTSIAVV ELILVALFSY ALGHYLTRQL
GLLRAGAKKI SYSVLSGDFN DTRIAIKTKD ELGEVAHAFN QMVETLEAEC VRVKKYQEEL
EHLNQTLEKR VVARTQLLED KNAQLSLINF ELKSTQEQLV QAEKMASLGQ LAAGVAHEIN
NPIGFVSSNL TSLSEYADVY VKLGQHITDW QSSETPEDRK KYENSLIEFI QSENLAFMQE
DIQALINESN EGLIRVKDIV SGLKQFSRAD SKESQYFDIN DCVKTTLSMV SNELKYHCDI
VTHLQDVPQV NINVGKICQV LTNLFINAGQ AIGSQNTSRQ SIAPQSIAPQ SIAPQGVITI
ETYSHHELVY VVVSDTGHGI PAENLKRLFD PFFTTKPEGQ GTGLGLAISF GIAQEHGGDL
SVFSEEHKGS RFTLSLPVTT LPTETV
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