| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1492 |
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| Symbol | |
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| ID | 4172218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1792239 |
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| End bp | 1792799 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054502 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_661069 |
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| Protein GI | 109897814 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACGA ATCCCCTGTA TACGCTGACC CTCACCGCCT TGCTATTAAC ATTAAGTGGT
TGTGCAAGTC AGAAAAGCCC AGCGACAAAG AAAATCGAGC CCTCGTTAGA AATCCCCTCG
GTTACACAAC AAAAAAGCGA AACCAATCAA GCCTGCATCG ATATTATTAA AGATTCCGAA
GGTGTAAGAC TTAACGCTTA TAAAGGCCCG GGTGGACATT GGTTAATCGG TTACGGTCAC
AAAGCGGGTG TAAAGCAAGG CATGACAATA AATGCCCCGC AAGCCGAGGT ATTACTTAAA
GCAGACCTGC TCAAAATAGA AGACCAAATG CACAAGTTAG TTAAAGTACC GGTAAACAAT
AATCAATTTA GTGCATTGGT TTGCTTGGGG TACAACATCG GCATGGGCAA CCTATACAAA
TCAACTTTAT TGCGCTTACT GAATAAAGCG GATTACACAG GGGCAAGCGA GCAATTTAGC
GTATGGCGCA AAGCAGCCGG TAAAGTCAAC GCGCATCTGG TGCAACGCCG TGCAAAAGAG
AAAAGTTTGT TTGATAGGTA A
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| Protein sequence | MKTNPLYTLT LTALLLTLSG CASQKSPATK KIEPSLEIPS VTQQKSETNQ ACIDIIKDSE
GVRLNAYKGP GGHWLIGYGH KAGVKQGMTI NAPQAEVLLK ADLLKIEDQM HKLVKVPVNN
NQFSALVCLG YNIGMGNLYK STLLRLLNKA DYTGASEQFS VWRKAAGKVN AHLVQRRAKE
KSLFDR
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