| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1453 |
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| Symbol | |
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| ID | 4173610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1747835 |
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| End bp | 1748974 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054463 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_661030 |
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| Protein GI | 109897775 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0348948 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTTG ATTACGAGAC GTTGAAATTA TTGTGGTGGT TGATCATTGG CATTCTGTTA
ATTGGCTTCG CGGTAACTGA TGGCATGGAT ATGGGTGTGG CTATGCTGCT GCGCCTAGTA
GGTAAAACGG ACAGCGAACG CAGAACGGTT ATTAATACCA TCGGCGCGCA TTGGGATGGC
AACCAAGTGT GGTTCATTAC CGCTGGTGGT GCATTATTTG CGGCTTGGCC CATGGTGTAT
GCCGCCGCCT TCTCGGGTTT TTACTTCGCA ATGCTACTGG TCTTGTTCGC GTTATTCTTT
CGCCCACTGG CCTTTGATTA CCGGAGTAAA ATTGATACGT ACCGCTGGCG TAATAATTGG
GACTGGGCGC TATTCGCCGG CAGTGCCATT CCTGCGTTGG TTTTCGGTGT TGCTTTTGGC
AATCTGTTTT TAGGGGTGCC TTTTAATATC GACAACCTGC TGCGTGCTAG TTACCAAGGT
TCGTTCATCG GTTTGCTTAA TCCATTTGGC ATCTTGGCCG GCTTAGTTAG CATTACTATG
TTAATGGGCC ATGCGGGCAT GTGGTTGCAG CTACGTACCG ACAGCGATGT CGCCATGCGC
TCAGGCCAAT ACGGACGATA CGCCTTAATC ATATTTATGG TGCTCTTTGC TATCGCAGGC
TTCTGGGTAG CCAACATGGA CGGGTACCAA ATTGTCAGCA TGCCTGATAC GCAAAGTTAC
GCTAATCCTA TTGCTAAAGT GGTTACCTCA GCGTCAGGAG CGTGGTTAGA CAACTACAGC
GCAATGCCAC TAACGTTAAT TTTCCCTGCA CTGGGGATGG GGATGGCAGC GCTTGCTTGG
TTCTTCTCAA AAGTGGGTAA ACCTGCGCTT GGTTTAGTGT CTTCTAGCTT GATGTTAGTG
GGCGTTATTA TGACGGCAGG AGCATCGTTG TTCCCATTCG TTATGCCCTC AAGCAACAAC
CCTAACGTGA GTTTAACCAT GTGGGATGCG GTTTCGAGCC ATATGACGTT GAACGTTATG
TTTGTGGCAG CGGCTATTTT TGTACCATTG ATTCTGGCGT ACACCACTTG GTGTTACGTG
AAGATGTGGC GCAGGGTGAC CGTGCATGAA ATTGAAAATA ACACCCATGG TAGCTATTAA
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| Protein sequence | MIFDYETLKL LWWLIIGILL IGFAVTDGMD MGVAMLLRLV GKTDSERRTV INTIGAHWDG
NQVWFITAGG ALFAAWPMVY AAAFSGFYFA MLLVLFALFF RPLAFDYRSK IDTYRWRNNW
DWALFAGSAI PALVFGVAFG NLFLGVPFNI DNLLRASYQG SFIGLLNPFG ILAGLVSITM
LMGHAGMWLQ LRTDSDVAMR SGQYGRYALI IFMVLFAIAG FWVANMDGYQ IVSMPDTQSY
ANPIAKVVTS ASGAWLDNYS AMPLTLIFPA LGMGMAALAW FFSKVGKPAL GLVSSSLMLV
GVIMTAGASL FPFVMPSSNN PNVSLTMWDA VSSHMTLNVM FVAAAIFVPL ILAYTTWCYV
KMWRRVTVHE IENNTHGSY
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