Gene Patl_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1374 
Symbol 
ID4171871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1656696 
End bp1657046 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID638054387 
Producthypothetical protein 
Protein accessionYP_660954 
Protein GI109897699 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA ATACAGCAAC AAACATGATG CAAGCAGCCA TAACATCGGC GCGTGCAAAT 
AATCAACACA TCGCGATTTG TGTCACCGAT GGTCACGGTG AACTGTTGTG CTTCAGTCGT
ATGGATGACG CCAGCTTGCA AGCGGGTGTC TTGGCGCAAA CCAAGGCATA TACTGCAGCA
CGAGAGCGAC AAACTACGCG CCAACTTGCC ACGTGGGCGC AAGAAACCCA TAAAGACATG
GGATATTGGA ATGATGCTAA ATTTACTGGG ATCGCAGGTG GTGTGCCAGT ATTTGTTGAT
ACAAAGTGTG GGGGCAGTCG GCGTGAGCGG TTTAAGCGAA TTAGAAGATG A
 
Protein sequence
MNLNTATNMM QAAITSARAN NQHIAICVTD GHGELLCFSR MDDASLQAGV LAQTKAYTAA 
RERQTTRQLA TWAQETHKDM GYWNDAKFTG IAGGVPVFVD TKCGGSRRER FKRIRR