Gene Patl_1367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1367 
Symbol 
ID4171864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1647909 
End bp1648565 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content46% 
IMG OID638054380 
Productputative lipoprotein 
Protein accessionYP_660947 
Protein GI109897692 
COG category[S] Function unknown 
COG ID[COG4764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGTA ATGTGTACCT TCATCCAAAG TCCGGTCAAA TTAAGCTCGG TCAAATTTTA 
CTGCTGGCTG CTTCCATCTT TTGTCTGTCA AGTTGCACCA CAACGCCACC GAAGAACATC 
AGTAATATTT GTGAAATATT TTTCGAAAAA CGCGATTGGT TTGATGCCGC TGACGACATG 
ACGGAAAAGT GGGGCGTGCC TATGCATGTG CCTATGGCAA TGATGTATCA GGAAAGTTCG 
TTCCGGGCAG ATGCTTTGCC GCCAAAAGAC TATGTGTTTT TCGGTTTAAT CCCTTGGGGG 
CGGGTGAGCA GCGCTTATGG TTACTCCCAA GCTAAAACTC CAACGTGGGC TGATTACACG 
CGCGAGACAG GAAATGGCTG GGCGAGCCGA GAAGATTTTG ACGACGCCAT GGATTTCATG 
GGGTGGTTTA TCAGTAAAAC CAACAAAATT AACCGCGTTT CAAAATGGGA TGCTGAGCTG 
CAATATCTGA ATTATCATGA AGGATGGGGC GGTTATAAAC GTAAAAGCTA TCGTAAAAAA 
CGCTGGTTAC AAAAGGTCGC CAAAACCGTC AAGGCGCGTT CGTTGCGTTA CGCAACTCAA 
CTTAAGGGCT GCCGCAAAGA GTTAGAGAAA GGCTGGTTTA TGCGTTTGTT TACCTAA
 
Protein sequence
MSRNVYLHPK SGQIKLGQIL LLAASIFCLS SCTTTPPKNI SNICEIFFEK RDWFDAADDM 
TEKWGVPMHV PMAMMYQESS FRADALPPKD YVFFGLIPWG RVSSAYGYSQ AKTPTWADYT 
RETGNGWASR EDFDDAMDFM GWFISKTNKI NRVSKWDAEL QYLNYHEGWG GYKRKSYRKK 
RWLQKVAKTV KARSLRYATQ LKGCRKELEK GWFMRLFT