| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1349 |
|---|
| Symbol | |
|---|
| ID | 4171846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 1624389 |
|---|
| End bp | 1624835 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638054362 |
|---|
| Product | ribosomal-protein-alanine acetyltransferase |
|---|
| Protein accession | YP_660929 |
|---|
| Protein GI | 109897674 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | [TIGR01575] ribosomal-protein-alanine acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT TAATTCAGCT CAATCAAGAT AACTACCGAT GTGCCTATGC CATCCATTGC
CAAGGGCACA CTCACCCTTG GTCTGAACCT GTGTTTGCTG ATTGCTTGAC CGATAATTAT
CAAGCCTATG CGTTACTGCA AGACGACATG TATGCAGGCT TGTATGTTGG ATTATTTGTG
GTTGATGAAG CCACTTTGAT GGATATAGCT GTTGGTGAAG CGTTTCGCGG TCGAGGGCTA
AGTAAGGTGT TGATGTCACA TTTTTTAGCA TTGTGCGTAA ATAAACACAT GCATTGCGTT
TGGTTAGAAG TTAGGGCATC TAATGTTGCC GCAATAGGCT TATATCAAGC ATATGGTTTC
GAGCAAATTG AGTGTCGTAA AGACTATTAT GAAACGCAGG ATGGACGAGA AGACGCGTTG
ATGATGAAGT TAGTACTGGG TGACTAA
|
|---|
| Protein sequence | MTDLIQLNQD NYRCAYAIHC QGHTHPWSEP VFADCLTDNY QAYALLQDDM YAGLYVGLFV
VDEATLMDIA VGEAFRGRGL SKVLMSHFLA LCVNKHMHCV WLEVRASNVA AIGLYQAYGF
EQIECRKDYY ETQDGREDAL MMKLVLGD
|
|---|
| |