Gene Patl_1308 details

Gene Information

• Locus tag: Patl_1308
• ID: 4173356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1576809
• End bp: 1577585
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 638054315
• Product: hypothetical protein
• Protein accession: YP_660888
• Protein GI: 109897633

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCTC TACTATTAGC AACTTTATGC ACGGGTCTTC TGGGTGGTTG CTCCTCTATG 
TCCTCAATCA TGCCCTTTTC AGATGATGAC GACGCAGGCC GAGACTACGC CAACGCATCT 
TCAGATGCCC AAGCTGTGCA AGCACAACCT CTTTCGCTTT CTGCCATCGA AACTAGTGCT 
GAATTTAATC AAGACGTGCA ACAAAAACTC ATCAGCAATC AGCCAGCAGC CGTGCAACAT 
AAGTTGCTAG AAATGGCAAA AAAGCCCAAG GGATACGACA AAGACATTAA TTTTTATGTA 
CGTGGTTTAA TGCAAGATTT AGCCGGCAAT TTACAATACG TGAACAATAC CACTCCTGTG 
GCCGTCACCA GCTTTGTATT ACTAGACAGT GATTACAGCA AAACGAATTT AATCGGCACA 
CAAATGGCCG AGAGCGTCAT GCACGAAGTG CACAAATTAG GTATTCCTGT GATTGATTTT 
AAAACCACAG ATTATGTTCG CGTGACGCCC GACGGGGATT TCATCTTTAG TAAGGACTAC 
GAAGAATTAA ACGGCGACTC ACCTATTCGT TACGTGTTGG GCGGCACCCT AGTCAAATAC 
AATGATGGCT ATTTAATTAA CGCCAGAATG GTCGGTATTG ATTCAAAAGC CGTGGTCGGC 
TCGGCGCAGA GCTTCATTCC TAACAACGTA GTCAGCGCTA TGATGTCGAA TGAAAAAAGC 
ATGCAAGACG TCGAAGCGGA TAAAGGTATG GCTAAAAAGA CCATTGTTCA GGGCTGA 

 

Protein sequence

MKPLLLATLC TGLLGGCSSM SSIMPFSDDD DAGRDYANAS SDAQAVQAQP LSLSAIETSA 
EFNQDVQQKL ISNQPAAVQH KLLEMAKKPK GYDKDINFYV RGLMQDLAGN LQYVNNTTPV 
AVTSFVLLDS DYSKTNLIGT QMAESVMHEV HKLGIPVIDF KTTDYVRVTP DGDFIFSKDY 
EELNGDSPIR YVLGGTLVKY NDGYLINARM VGIDSKAVVG SAQSFIPNNV VSAMMSNEKS 
MQDVEADKGM AKKTIVQG