Gene Patl_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1300 
Symbol 
ID4173348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1566972 
End bp1567613 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content38% 
IMG OID638054307 
Producthypothetical protein 
Protein accessionYP_660880 
Protein GI109897625 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.230835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA GATCTTCGCA TATAGCGATT CTTGCCTCAA TGCAGCTTGC CGGATGTAGT 
TCATTCTTCG TATCAGACAG TAATATTTGT TTTAGCGATA TCGGAAAGGC GCTGGATTGT 
AGCGAATTTA CTAATTATTC AAACTTATCT ACAAGTAGCT TAGAGAAGGA ATTTGATGAT 
GAAACGCAAT ACCTAAAAGT TGCCTCTAAA TCGAATATAA ACTCTCAGCT TTTGAGTGAA 
TATATTGAGA AACTAACGAT TGACTTAAAA CATAGTCTTG GTGAGGAAAC TGTTTCTTCC 
CCTATCGCAG TGACTACGTT TGTAAATCTT GATCCAACGG TAGATAGCAG CATACTAGGA 
ATACACCTTA GTGAGTATTT CACTAATGAA CTAAAAAACG TAGGTTTACC TGTAAGTGAC 
TACACGGGCA GTGGTTTTAT TAAAGTTAAT ACAAGTGGTG CATTTGCTAT CCCTAAAAGA 
GTCGAGCAAA AACATGAAAT CGGCTACGTA TTAACAGGCT CTCTTATTCA AGATCCGCGG 
GGAACCATGG TTAATGTAAG AGTGATATCA CTGCAGACCA ATAGCGTTGT TGCTTCAAAC 
AGCAAGTTAA TTCCTTCTAT GGTCACGTCA GGATTTCATT AG
 
Protein sequence
MKFRSSHIAI LASMQLAGCS SFFVSDSNIC FSDIGKALDC SEFTNYSNLS TSSLEKEFDD 
ETQYLKVASK SNINSQLLSE YIEKLTIDLK HSLGEETVSS PIAVTTFVNL DPTVDSSILG 
IHLSEYFTNE LKNVGLPVSD YTGSGFIKVN TSGAFAIPKR VEQKHEIGYV LTGSLIQDPR 
GTMVNVRVIS LQTNSVVASN SKLIPSMVTS GFH