Gene Patl_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1282 
Symbol 
ID4173293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1540394 
End bp1540954 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content44% 
IMG OID638054289 
Producthypothetical protein 
Protein accessionYP_660862 
Protein GI109897607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGACT TGATCAAAGT GAATAGAGCG AACAGGGGGG AGAGGAAAAT CAGTAAGTGG 
CTTTTTCTGT GCGCCATCTT GTTATCTTAT ATCGTGGTTT TACACTCGGC TTTAGCACAA 
GAGGAGTTGA GTAAGGAGCG CAAACTAAAG GCCGCCTATT TACTGAATTT TACTAAATAT 
ATGAGCTGGC CCACAGATAG TGGCGCGCAA AATGATTTCA AATTGTGCCT GCAAAGTGAT 
CGGCCATTCT TTGAATTTAT GCAGGCCCTT GTGGCACGTC ATAATCAGGG AAACAACAAG 
ATGCATATCG CCATCGGTCA TGTCCAGGAA GAGCCGCTAT GTCATATGGC ATACTTTCAT 
TCTTCTCTTG AGCAACCACT AGACCAAATG AGGCGGGCGG TGATTGTGCT AGAGTCCACG 
GACGTGAAAC AAGCGAACAG CGCGATAAGG TTTTATACCC AAGAGCAAAG AGTGCGCTTT 
GAGTTTGATT TAGCACAATT AGCCAGAGTA GACGTGATAG TAAGCTCTGA ATTGCTTAAA 
TTAGCTAGGA TTGCTCGATA A
 
Protein sequence
MSDLIKVNRA NRGERKISKW LFLCAILLSY IVVLHSALAQ EELSKERKLK AAYLLNFTKY 
MSWPTDSGAQ NDFKLCLQSD RPFFEFMQAL VARHNQGNNK MHIAIGHVQE EPLCHMAYFH 
SSLEQPLDQM RRAVIVLEST DVKQANSAIR FYTQEQRVRF EFDLAQLARV DVIVSSELLK 
LARIAR