| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1164 |
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| Symbol | |
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| ID | 4173215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1404126 |
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| End bp | 1404761 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054171 |
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| Product | peptidyl-prolyl cis-trans isomerase, cyclophilin type |
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| Protein accession | YP_660744 |
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| Protein GI | 109897489 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTCCCT ACCCTCGCTC TATACTTCTT TCGTTAGTGT TGCTTAGTTT AACAAATTCA
CTTTTTGCAT CTGCGCAAAC CCCACTGACG TCACAAAAAG CAACTCAACA AGCTGTCATT
CAAACCGCTT TAGGGAATAT TGAAATAGCA CTATTTGCAC AAAAAGCACC TGTTACTGTG
GCTAATTTCA TTGCATATAT TCAACAATCA GCGTTCACGG GAGGCGAATT TTACCGCGTA
GTGGGCCCTG ATAACGACCA AGGCACACCA CCAATATCGG TTATTCAAGG GCGCACTAAC
CCTCAGTTCG AGGACTTCCC GCCTATCGTG CTTGAAACCA CTAAACTCAG CGGAATAAAA
CACAAAGACG GAACCTTATC GATGGCCAGA GGTGGGCCCA ACACTGCTAC TCAACAGTTT
TTCATTTGTG TTGGGGAGCA GTCTTCTCTC GATTATGGCG GCGCTAGGAA TCCTGATGGT
CAAGGTTTTG CTGCATTTGG GAGAGTGACT GCAGGAATGG ATATCGTCAA AAAAATTCAA
CGTAATCGAC AGGCAAAAGT CGTTGAAGAT CCCTACATTA AAAATCAGAT CTTAGCCCAA
TCTATCAAAA TAATAGCCAT AACATTGGCT GAGTAA
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| Protein sequence | MSPYPRSILL SLVLLSLTNS LFASAQTPLT SQKATQQAVI QTALGNIEIA LFAQKAPVTV
ANFIAYIQQS AFTGGEFYRV VGPDNDQGTP PISVIQGRTN PQFEDFPPIV LETTKLSGIK
HKDGTLSMAR GGPNTATQQF FICVGEQSSL DYGGARNPDG QGFAAFGRVT AGMDIVKKIQ
RNRQAKVVED PYIKNQILAQ SIKIIAITLA E
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