| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1096 |
|---|
| Symbol | |
|---|
| ID | 4173625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1317430 |
|---|
| End bp | 1319274 |
|---|
| Gene Length | 1845 bp |
|---|
| Protein Length | 614 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638054102 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_660676 |
|---|
| Protein GI | 109897421 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCA GGGAAGATAT AAACGCGTTG CGGGCGATCG CCGTTATAGC CGTAGTCATT
TTCCATTTCA ACCACGCTTG GTTGCCAGGG GGATTTGCTG GAGTCGACGT ATTCTTTGTT
ATATCAGGCT TTCTGATGAC AATGATAATC GTTAAAGGCG TAGAGCGGAA AACGTTTTCA
ATAATAGGTT TTTATCAAGC GAGAGTAAGG CGGATTATTC CGGCCTTGGC GTTTCTTTGC
TTTGTTCTCA TGGTCTTAGG CTATTTTTTA CTTTCTCCTA TCGATTACCT TAATATGGGT
AAACACACCA CAGCAAGTTT AACGTTCACA TCAAATTTCG TTTACTGGAA AGAGTCTAAC
TACTTTGATG CTTCATCAAT TGAAAAGTGG CTGTTACATA CGTGGAGTCT GTCTGTAGAG
TGGCAGTTTT ACTTAATGTA TCCGGTGGTT TTGGTAATAC TGAGTAAATT TTTAAATTTG
AAGCAGCTTA AACTACTGCT GGTTGCCACT ACACTCTTAG CGCTGCTTCT CTCTATTTAC
GTCACATTAA ACACTAGCAG TGCAGCCTAC TTCTTATTAC CGACTAGAGC GTGGCAGATG
CTTGCTGGAG GGCTAGTCTT TTTGTACCCC ATCGCTTTGG GGCCAACAAC CAAACGCCTT
GGCTTGAGCA CTGGCTTACT ATTAATCGTT TCATCATTTT TCCTATTCTC AGCGGAAACA
CCTTGGCCTG GCTATGCATC TTTGCTGCCT ATATTAGGAG CTTGTTTAGT CTTAATTTCT
AACAATGGCG GATCGCTTAT CGTTGATAAC AGACTTTGCC ACATGCTAGG TAAATGGTCT
TACTCCATTT ACTTGTGGCA CTGGCCCATC ATAGTCGCAG GTTTTTACTT CTCTCTAGGT
GAGAATTGGT GGATGGTGGG CTTACCGCTT TCAATCCTTC TAGGCGCTTT AAGCTTTGTC
TTTATTGAAT CAAAATCATT GGCTGATTAT GGTTTACACA AAATGAAGTA TCTACTGAAA
CCATTGCCCG CAGCCTCACT TCTTGCTGTG TTCGGCCTTG TGGTTTTTCT GACAAATGGC
TTAATAAATC GACTTGCCGA ACCAGAGAGA ACTCTCGTTG CATCGGCAAT CACGGCGAAA
AGTGATTGGA GCTACCCCAA AGCGAATAAA GTTATAGGGC CTCTCAAAAT CAGATTCATT
CGCGGAAAAA CCGATAGGAA TATCTTAGTT TTAGGCTCAA GCCATTCTGA ACAGTTATAC
CCGTATGTGG AGGGGCTAAA CTCTGATTAC AATGTTTATT TCTTAACAAA TGGCGGGTGC
CTTGCAACGC CCTCGATGAA ACACCCCAAA TGGAACTGCG ACAATTTACA GAACTATCAG
CTTCTTTTAG ATAAGGTCAA ATTCGATAGA ATCGTGACTA CTTTTTTTAA TTTTGACGTG
TATTTATCAA ACATCGAAAC GAAAAGGAAA GAACAGTTAG CGCTTAGAAC CAAAGAATAC
GACGTCTTTC TTGCTCAGCT AAAAGCCGCC GCTAAGGAAG TGTATTTGAT TTTAGGAGAG
CCAAGGGGAG AAGAGTTTAA TCCGCAGGCT GTCATTCGAC ATGGATTAAA AGCCTTTATG
ACAGAAGAAG AAACACGAAA TACTTACGCA ATTCACCACG AAGCCCTAAG CCTTTTCACC
GAGCTCGGTG ATATTGAAAT AATAGACCCC ATCGCGCACT TGTGTAATGA AGGTATTTGC
AGCACCAGTG ATGACTCCCG AGGCTTCTAC TATAAAGATA ATAATCATAT GCGGCCTTGG
TATGCCATTG AAAAATTGAC GTATTTGGAT CACATCTTCC TATAA
|
|---|
| Protein sequence | MKFREDINAL RAIAVIAVVI FHFNHAWLPG GFAGVDVFFV ISGFLMTMII VKGVERKTFS
IIGFYQARVR RIIPALAFLC FVLMVLGYFL LSPIDYLNMG KHTTASLTFT SNFVYWKESN
YFDASSIEKW LLHTWSLSVE WQFYLMYPVV LVILSKFLNL KQLKLLLVAT TLLALLLSIY
VTLNTSSAAY FLLPTRAWQM LAGGLVFLYP IALGPTTKRL GLSTGLLLIV SSFFLFSAET
PWPGYASLLP ILGACLVLIS NNGGSLIVDN RLCHMLGKWS YSIYLWHWPI IVAGFYFSLG
ENWWMVGLPL SILLGALSFV FIESKSLADY GLHKMKYLLK PLPAASLLAV FGLVVFLTNG
LINRLAEPER TLVASAITAK SDWSYPKANK VIGPLKIRFI RGKTDRNILV LGSSHSEQLY
PYVEGLNSDY NVYFLTNGGC LATPSMKHPK WNCDNLQNYQ LLLDKVKFDR IVTTFFNFDV
YLSNIETKRK EQLALRTKEY DVFLAQLKAA AKEVYLILGE PRGEEFNPQA VIRHGLKAFM
TEEETRNTYA IHHEALSLFT ELGDIEIIDP IAHLCNEGIC STSDDSRGFY YKDNNHMRPW
YAIEKLTYLD HIFL
|
|---|
| |