Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1045 |
Symbol | |
ID | 4172831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1248648 |
End bp | 1249166 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638054051 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_660625 |
Protein GI | 109897370 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00624396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCAC AAGCACCTCA GCATACTATT TTCATCAGTG TTGGCAGTAA CATTAATCGA GAGCAGCATA TCAGTGCTGG TCTTGATGCT ATGTATGCAG CGTTTGGTGA ACTCACTTTA TCATCGGTTT ACGAAAGCAA ATCCGTTGGA TTCGATGGAA ATAACTTTTA CAACTTAGTG GTACAGGCCG ACACTCACTT ACCCATCATT GAAGTGGTAG AGCGCTTAAA GAAAATAGAA ACCGAAAACC TGCGCACCCG CGAAAGCAAA AAATTTGCTC CGCGAACGTT AGATCTTGAT TTACTGACAT ACGATGATGT CATTATTCAA ACACCGATGG AACTTCCACG CCCTGAGATC CTCTACAATG CGTTTGTGTT GCAGCCTTTA GCGGAAATTG CACCTGAAGT AGAGCATCCG CTAGCGAATA AAAGCTACCT TTCCTTATGG CAGCAATACG ATAAATCCCA ACAACAGTTA TGGCCTATCA AATTTACATG GAGCGCTAAT CGCCAATGA
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Protein sequence | MSAQAPQHTI FISVGSNINR EQHISAGLDA MYAAFGELTL SSVYESKSVG FDGNNFYNLV VQADTHLPII EVVERLKKIE TENLRTRESK KFAPRTLDLD LLTYDDVIIQ TPMELPRPEI LYNAFVLQPL AEIAPEVEHP LANKSYLSLW QQYDKSQQQL WPIKFTWSAN RQ
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