| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1040 |
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| Symbol | |
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| ID | 4172826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1245558 |
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| End bp | 1246001 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638054046 |
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| Product | hypothetical protein |
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| Protein accession | YP_660620 |
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| Protein GI | 109897365 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1610] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000624068 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCTTGT TAGATGATTT AAAAAATGCC CAAAAAGACG CAATGCGTGC CAAAGACAAA
GTTCGTCTAG GTACTATTCG TATGGCGTTA GCAGCGGTTA AGCAACGTGA AATCGATGAG
CGTATTGAGC TCAACGACAG CGATGTCATT GCTCTGCTTA CTAAGATGGT AAAACAGAGA
AAAGACGCTG CGAGTCAGTT CGAACAAGCC AATCGTCAAG ATTTAGTTGA TGTAGAACTT
ACTGAAATTG ATATTTTGCA CACTTTTTTG CCTCAGCCTT TGAGCGAAGA AGAAGTCAGC
ACCTTGATTG ACCAAGCAAT GGTTGAAACA CAGGCAAGCG GAATGCAAGA TATGGGTAAA
GTAATGGCTT GGTTGAAACC TAAGGTTCAA GGTCGAGCTG ACATGGGAAA ATTAAGCGGT
CAAATAAAAG CCAAGCTAGC TTAG
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| Protein sequence | MSLLDDLKNA QKDAMRAKDK VRLGTIRMAL AAVKQREIDE RIELNDSDVI ALLTKMVKQR
KDAASQFEQA NRQDLVDVEL TEIDILHTFL PQPLSEEEVS TLIDQAMVET QASGMQDMGK
VMAWLKPKVQ GRADMGKLSG QIKAKLA
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