| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0985 |
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| Symbol | mgsA |
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| ID | 4173487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1177288 |
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| End bp | 1177695 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638053986 |
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| Product | methylglyoxal synthase |
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| Protein accession | YP_660565 |
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| Protein GI | 109897310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1803] Methylglyoxal synthase |
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| TIGRFAM ID | [TIGR00160] methylglyoxal synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0342245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAGA CGTTAGCGCT GGTCGCGCAT GATCATAAAA AGCCAGAGCT TATCCGCTGG
TCACTAGAGC ATAAAGCAGA GCTAGAAAAA CATAACTTAG TGGCGACAGG CACGACAGGG
GGCTTACTAC AAGAAGCGTT AAACTTGCCC GTTACGCGAT ATAAGAGCGG CCCACTAGGC
GGCGACCAAC AAATAGGGGC ATTGATCGCC GAAGGTAAGT TAGACGCTTT GATTTTCTTT
TGGGATCCCT TGAACCCAGC CCCCCATGAC CCAGACGTAA AAGCGCTGTT GCGTTTGTGC
TCAGTATGGA ATTTGCCGGT AGCGTGTAAC ACTTCTACAG CGGATATGTT GATCACCTCG
CCGCTATTTA TCGAGGGATT ATACGAGCGG GCAGTGCCGG AGTTTTAA
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| Protein sequence | MQKTLALVAH DHKKPELIRW SLEHKAELEK HNLVATGTTG GLLQEALNLP VTRYKSGPLG
GDQQIGALIA EGKLDALIFF WDPLNPAPHD PDVKALLRLC SVWNLPVACN TSTADMLITS
PLFIEGLYER AVPEF
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