| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0983 |
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| Symbol | |
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| ID | 4173832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1174917 |
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| End bp | 1176062 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053984 |
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| Product | acetylornithine deacetylase |
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| Protein accession | YP_660563 |
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| Protein GI | 109897308 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCTT TGTCTTTTTT AGAACGTTAT GCACATATCA TCAATACTCC CTCTATTAGC
GCCTTTAGTG CAGATTTAGA CCAATCAAAC CGCGCCATTA TCGATCTGCT AGCGGGCTGG
TTTAAAGACT ACAATTTCCA CATAAGTATT CAACAAGTGC CCAATGCGCG AAATAAGTAC
AACATGCTAG CTAAAATTGG CAGTGGTGAG GGGGGGCTAC TACTATCCGG CCATTCGGAT
ACTGTGCCCT TTGACGACAA TAAATGGCAA TTTGACCCTT TTAAAGCACA AGAAAACGAT
GGCAAGTTAT ACGGTTTAGG CACCTGTGAC ATGAAAGGTT TTTTTGCATT CATCTTAGAA
GCGATTCAAG ACATTCCTCT AAAAGACTTA AAGAAGCCTT TGTATATTTT GGCTACTGCA
GATGAAGAAA CGTCCATGGC GGGAGCGCGG TTTTTTGTGG AGCAACAATT GATTAAGCCA
GACATGGCGA TCATCGGTGA GCCCACAGAA CTTAAGCCGA TCTTTAAGCA CAAAGGGCAT
ATGGGGCATA GCCTGAATAT TCAAGGTAAA GCAGGGCATT CAAGCGATCC AGCAAAAGGG
GTCAATGCGA TTGAGATCAT GTACCAAGCC ATAGGGAAAC TTATCGCTTT AAAACAACAG
TTGTCTGAAA ATCATAGAGA TGATGCCTTC AGCGTGCCAG AGGTGACTAT GAATCTCGGG
CATATTCACG GGGGCGATGG GGAAAACCGT ATTTGCGGAC ACTGCCAATT AAATTTTGAT
TTGCGCGCTA TTCCCTCACT AAGTGACGAA GAAGCCATTG CCATGATTGA CGAAGCACTT
GCCCCGCTGA TGCAAAAATA CCCACAGCGC ATTACTCGTG AGGCGATGTA CGAAACAGCG
CCAGCTTTTG GTTGTCGAAA TGAGCAGGGT ATTCTTGAAT TGGCCAAAAA ACTAACGGGC
TTTGATCCTG TCAGTGCTAA TTACGCCACC GAAGCGCCAT TTATCAATCA ATTAGGCTGC
GACACCATTG TATTAGGCCC TGGCAGTATT GATCAGGCCC ATCAACCAGA TGAGTTCATC
TCGTTGCATT ATGTTGACCC AACCGTCACA TTACTGCGTA ACTTCATCAA GCAGGTCTGC
TTTTAA
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| Protein sequence | MPSLSFLERY AHIINTPSIS AFSADLDQSN RAIIDLLAGW FKDYNFHISI QQVPNARNKY
NMLAKIGSGE GGLLLSGHSD TVPFDDNKWQ FDPFKAQEND GKLYGLGTCD MKGFFAFILE
AIQDIPLKDL KKPLYILATA DEETSMAGAR FFVEQQLIKP DMAIIGEPTE LKPIFKHKGH
MGHSLNIQGK AGHSSDPAKG VNAIEIMYQA IGKLIALKQQ LSENHRDDAF SVPEVTMNLG
HIHGGDGENR ICGHCQLNFD LRAIPSLSDE EAIAMIDEAL APLMQKYPQR ITREAMYETA
PAFGCRNEQG ILELAKKLTG FDPVSANYAT EAPFINQLGC DTIVLGPGSI DQAHQPDEFI
SLHYVDPTVT LLRNFIKQVC F
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