| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0966 |
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| Symbol | |
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| ID | 4173815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1153897 |
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| End bp | 1155081 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638053967 |
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| Product | saccharopine dehydrogenase |
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| Protein accession | YP_660546 |
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| Protein GI | 109897291 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3268] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.287353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA TGAGCACAAA CAAAGAATTC GATATCGTCG TTTATGGCGC TTCAGGCTTC
ACCGGCCGAC TTGTAGCAGA ATACTTGGCT AAGCAATATA AAGATGACAA TAGCTTTAAA
TGGGCGATGG CGGGTCGTAG CGCTGATAAG CTCGCTCAAG TACGAGATGA AATAGGCGCA
CCAAAAGATA TCCCTTTGGT AGTGGCGGAC GCAGAAGATG CATCCTCTAT GCAAGCGATG
CTTGATAACA CACGCTTAAT ATTGACCACC GTTGGTCCTT ATCAGCTTTA TGGCTCTGAG
CTAGTCGCCA TGTGTGCCCA ATCGGGTGTT GATTACGTTG ATTTGTGCGG TGAACCAGTA
TGGATGCGCC ACATGATTGA TGCGAACGAA GCTGCAGCCA AAGAAAGCGG TGCACGCATC
GTCTTCTCAT GTGGCTTTGA TTCCATCCCG TTCGATTTGG GCGTGTATCA CTTGCAGCAA
TTAGCCAAAG AAAAGTTCGG CCATACATTT AACCGAGTCA AAGGTCGCGT AAAGAAGATG
CAGGGGACTT TCTCTGGTGG TACGGCAGCA AGTTTGAAAG CAACGCTAGC GGCTGCCAAG
CAAGATCCTA AACAATTCCA GTTATTGCTA AATCCCTTTT CTTTGACTCC AGGGTTTGCA
GGTACCGAAC AACCAGCAGG AGATAAACCT TATTTTGAAG AGTCACTCAA CACCTGGGTC
ACTCCTTTTA TCATGGCTGC AATCAACACC CGTAACGTGC ATCGCAGCAA CATGTTGCTT
AGCCACCAAT ACGGCAGCGA TTTTGTTTAT GACGAAATGT TGATGACAGG TCCAGGTGAG
AAAGGCGAAA GCATTGCTAA AGCCGTTGCG AGCGATAAAG GCATGATGAA AGACGGCGGC
CCTAAACCCG GCGAAGGCCC AAGCAAAGAA GAGCGCGAAA ATGGCTTTTA TGAAGTTTTG
TTTGTGGGTA ATGATCAAGA TGGTCAAAAC CTAACGGTCA GTGTTGGCGC AACCCTTGAC
CCTGGTTACG GCTCTACGTC ACGCATGATT ACCGAAGCTG CACTTTGTCT TATTAAAGAT
GCCGGTGATA CCCCAGGGGG CATTTTAACA CCCGCCTCAG CCATGGGTGA CAAGCTCATT
ACGCGGTTAG TGGATAATGC TGGTCTGACG TTTAAGCAAC TGTAG
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| Protein sequence | MNKMSTNKEF DIVVYGASGF TGRLVAEYLA KQYKDDNSFK WAMAGRSADK LAQVRDEIGA
PKDIPLVVAD AEDASSMQAM LDNTRLILTT VGPYQLYGSE LVAMCAQSGV DYVDLCGEPV
WMRHMIDANE AAAKESGARI VFSCGFDSIP FDLGVYHLQQ LAKEKFGHTF NRVKGRVKKM
QGTFSGGTAA SLKATLAAAK QDPKQFQLLL NPFSLTPGFA GTEQPAGDKP YFEESLNTWV
TPFIMAAINT RNVHRSNMLL SHQYGSDFVY DEMLMTGPGE KGESIAKAVA SDKGMMKDGG
PKPGEGPSKE ERENGFYEVL FVGNDQDGQN LTVSVGATLD PGYGSTSRMI TEAALCLIKD
AGDTPGGILT PASAMGDKLI TRLVDNAGLT FKQL
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