| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0953 |
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| Symbol | |
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| ID | 4173130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1138987 |
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| End bp | 1140543 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053954 |
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| Product | hypothetical protein |
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| Protein accession | YP_660533 |
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| Protein GI | 109897278 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.420413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTAA GTAAAAAGTT GTCTTTATCA TTCTGTGCGG TGTCACTAGC ACTTAGCTCG
TCGGTTGTTC ACGGTATCGA AATCACATCC ACGGACGATG CCTCTGTTCT TTCAGATACA
TTGATCATTC CTAATAGCGG CGTCACTGTT ACCAGTGCGG TATTAAGCGG TGGCATGAAC
GATGTTGATT TCAGTACCCA AGCAGGAACA TACACTAATC ACTCTGGTAC TTACGGGTTG
CCTAGTGCTG GCGGTGTGGT GTTTAGTACC GGTAATGTTA ATGACTATGA AGATGGGCCA
AATAATAACT CAGGCGGTGA AAGCAATGGC GAGCTCCCTG GCAACGACGA TGGTCCTGGA
GATGGTGAAG GCGGCGGGGA TTGCGAAGGT GGTTGCGTAG AACTGCAAAG TTTTTCTCAA
TTTTCAGCTA GCTCAGGACC GTCTTTTTCA ACTCAAAGTG AAGGGCAAAC ATCGACTGTA
GAACCAAGCA GCACTGATTT AGGCCCAGAA AGTGGCACCA ATACACAAGA TCAAGATGTA
CCTGGTGCTC TCGATTTTGA ACAGACTAAT TCTGCCACTG ATGAGCAAAA TGCGCTTTTA
ACTCAGATAA CAGGACAGGC TGAACATTTC GACCCCGTCG AACTGAGCAT TACCTTTGAT
GTGGACGACA GTGTTTCAGT AATCTCATTT GTCGGTGCCT TTGGCTCTGA AGAGTTCCCT
GACTGGGTTA ATTCTGAATT TGTCGATGGC TTTGGCATGT TCCTTAATGG TGTAAATTTA
GCCCGTGCTG AAGTGACAGA TGGTTCAACC GATGGTGCGC CGGCGCTGAT CAATATTAAT
CATCCTGATT TTGCCCCAGT CGAAGGAACA GAGTTAAACG GCATGCTAGC GCCTAATGGT
ATTCCGATTT TGCAGTTTGA TATCCCTGTT GAACCAGGCA GTACAGGCAA CACCTTTACT
CTTCTATTGG CGGATGCGTC GGATGCGGCA CTAGATACCA CTATATTTCT AAGCAGCTTT
GGTAACTTCG ACTCAGAGGG AGGGGAATCT GAATTCACCC CTATTATGCC TGATGAAACT
AGCGATGATG GAGACTTCGT ATTCACATTA CCTGAAGTCG ATGCAGGGGA AACGATCTGG
TTCGATCCTG ATGTTGCCAC TGGTTATACC TATACAGCAA CAGACGGTGG CATGTTTGCT
AGCGTAACCG CCCCGACCTT GCTGAGCGTG AATGACAGTG ATGGGTATTT ACTCAGTTAT
TTAGTCAATG GAGTTGAACA AGTGGTGGCG TTAACCAGTG GTCAAACGTT TGAATTTGAC
ATGCCCGTGC CTGAATTCAC GATCTCTAGT ATTAACGTTG AACTCGCCTT AGATCCGACT
GATCCGTTAG CGTTCGTTAC CGGTGTGGCA TTTAGTGAAG GCGGTCAGTT TGGTGTGGTG
CAATCACCTA TCACACAATT TGTTGATGAC AGTGTCGCGG TTTCAGCACC GGGTACATTG
GCAATCTTTG CCTTATCACT GATTGGTTTA TGTGGTTTGC GTCGAAAGAG GTTTTAA
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| Protein sequence | MFVSKKLSLS FCAVSLALSS SVVHGIEITS TDDASVLSDT LIIPNSGVTV TSAVLSGGMN
DVDFSTQAGT YTNHSGTYGL PSAGGVVFST GNVNDYEDGP NNNSGGESNG ELPGNDDGPG
DGEGGGDCEG GCVELQSFSQ FSASSGPSFS TQSEGQTSTV EPSSTDLGPE SGTNTQDQDV
PGALDFEQTN SATDEQNALL TQITGQAEHF DPVELSITFD VDDSVSVISF VGAFGSEEFP
DWVNSEFVDG FGMFLNGVNL ARAEVTDGST DGAPALININ HPDFAPVEGT ELNGMLAPNG
IPILQFDIPV EPGSTGNTFT LLLADASDAA LDTTIFLSSF GNFDSEGGES EFTPIMPDET
SDDGDFVFTL PEVDAGETIW FDPDVATGYT YTATDGGMFA SVTAPTLLSV NDSDGYLLSY
LVNGVEQVVA LTSGQTFEFD MPVPEFTISS INVELALDPT DPLAFVTGVA FSEGGQFGVV
QSPITQFVDD SVAVSAPGTL AIFALSLIGL CGLRRKRF
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