| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0892 |
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| Symbol | |
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| ID | 4172938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1061178 |
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| End bp | 1063103 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053893 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein-like |
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| Protein accession | YP_660472 |
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| Protein GI | 109897217 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC GAGCATTTTT TAAAATGGGC TCGGCCAGCT TAGTGGCCGC TGGATTAGCA
CCTTTGAGCA GTCAGGCAAA GCCCTTGCCT TTTGGAATAA GCGACCGCCA CGCAGACGAT
TGGTATCAGT TAGGAACCGG TAAGAAGCAT CAGCAGCCGC AGCGCCGATC GGAGCTGAAC
GTCGACGTTG CGGTTATTGG TGGTGGGGCG GCAGGTATTT GCGCCGCAGT TGCCGCAGCT
CGAAAGGGAG CAAAAACGGT TTTAGTCCAA GACCGCCCCG TCTTAGGAGG CAATGCATCC
AGTGAAATGC GTGTGCACCT TAACGGCGTC AATCGCCTTA AAACTGGATT GGCCGAGCGA
GAAACGGGGA TTATCGAAGA AATGTTACTG CACAACCGTT TTGAAAATGC ACAGGAATCG
TTTCCCGTTT GGGACCACGT GCTCTACGAC TTTGTCGTAC GAGAGCCGAA TATCGAGTTG
ATGCTAAATA CGCAGGCCAT CGAAGCAATA ATGGATGGTG ACAAAGTCGC TGCGGCACGC
TGCTGGCAGT TAACCACAGA AAAAGAAATT ATCATTCAGG CGCCGCTTTT TATCGATTGC
TCGGGGGATG GGCTACTCGC AGCAAGCGCG GGTGCTGAAT ATCGCACCGG TAGAGAAGGG
AAGGCCGAAT TTAATGAAAC CTTTGCACCT GATGAGCCTG ACGGTTGGCA AATGGGCGCG
ACCTTATTGA TGTCAGCCAA AGATATGGGC CGACCTATGC CTTACAAACC CCCGTCTTAC
GCACTGAAAT ACGATGCGGA AAATGCCCAT GAAAGACGCA AGTTTAATGC CTATCACGAA
GGTATATGGT GGGTAGAAGT CGGAAGTGAC GAGGATATTA TTGGCGATCA GGAAATCAAC
CGCCACAAAC TCATGGGGTA TTTGCATGGT GTCTGGGATT ACATAAAAAA TTCAGGAAAG
TTTCCAGAAT CTGAGAACCT CGCCTTAGAC TGGGTAGGCT CCTTACCATC AAGACGCGAG
TCACGACGTT TTATCGGCGA TTACATTCAT TCTGAGCGAG ACTTAACGGG CTATAAACAC
TTTGCTGACG CCGTGGCATT TGGGGGCTGG GGGATCGATG AGCACAACCC TGGAGGAATT
GAAAACACAG CATTAGCACC GACTACCTTT CATGCCCACT TTGATGAGGT GTATCAAATA
CCGTTTCGCA GTTTGTATTC AAAGAATATC CCTAACCTGC TATTTGCAGG TCGAAATGTC
AGTCAAACTC ACATTGCGTT GGCATCATCA CGCATCATGG CTACCTGCGC GCTAATGGGC
CAAGCCGTGG GGACCGCTGC TTACCTGTGT CTACAAAAGG GAATAACGCC GAGACAGCTA
GCTCAACAGC ATATCAACAC ATTGCAAGAA GCCTTATTGC GCGATGATAT GTTCATTCCT
AAACGTCCAG CGAGCGATCC GCTGGATTTA GCCAGAAGAG CTAACGCTAT ATTTGCCTCG
TCAACACGCA CCGGTGACGC AAAACTACTG GTCGACGGGA TGTCTCGAGA TATAGATAGC
ACAGTACATC ATTGGCAATC AGAGTCGCTG CCTGCCTTTG TGCAGTTTGA GTGGGAAGAG
CCGGTGAGTA TTTCCTCAGT AGAAATTAAA TGCGATACCA ATGTGAAGCG CAATATCATG
ATGCGCAAAG ATTCAAAGAA CGACGAACTG TTCTTCAATG GTGTGCCACC AGAAATGATG
AAATCACTTG CAATTGAAGC GCGTATTAAA GGCCAATGGC AAACATTGTC TAGTGTAAAT
GATAATCGCA GCCGATTGAT CCGCAGTCAA TTTTCACAGC GTGATGTAAC TGCTTTGCGT
ATCAGTTTGA GTGAAACTTA CGGTAAATCG ACCGCTAAGT TATTTGAGGT GAGAGCGTAC
TCCTAA
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| Protein sequence | MKRRAFFKMG SASLVAAGLA PLSSQAKPLP FGISDRHADD WYQLGTGKKH QQPQRRSELN
VDVAVIGGGA AGICAAVAAA RKGAKTVLVQ DRPVLGGNAS SEMRVHLNGV NRLKTGLAER
ETGIIEEMLL HNRFENAQES FPVWDHVLYD FVVREPNIEL MLNTQAIEAI MDGDKVAAAR
CWQLTTEKEI IIQAPLFIDC SGDGLLAASA GAEYRTGREG KAEFNETFAP DEPDGWQMGA
TLLMSAKDMG RPMPYKPPSY ALKYDAENAH ERRKFNAYHE GIWWVEVGSD EDIIGDQEIN
RHKLMGYLHG VWDYIKNSGK FPESENLALD WVGSLPSRRE SRRFIGDYIH SERDLTGYKH
FADAVAFGGW GIDEHNPGGI ENTALAPTTF HAHFDEVYQI PFRSLYSKNI PNLLFAGRNV
SQTHIALASS RIMATCALMG QAVGTAAYLC LQKGITPRQL AQQHINTLQE ALLRDDMFIP
KRPASDPLDL ARRANAIFAS STRTGDAKLL VDGMSRDIDS TVHHWQSESL PAFVQFEWEE
PVSISSVEIK CDTNVKRNIM MRKDSKNDEL FFNGVPPEMM KSLAIEARIK GQWQTLSSVN
DNRSRLIRSQ FSQRDVTALR ISLSETYGKS TAKLFEVRAY S
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