| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0851 |
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| Symbol | |
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| ID | 4173700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1003648 |
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| End bp | 1004598 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638053854 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_660433 |
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| Protein GI | 109897178 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAC TTGGTGACGT ACTTTGTTCC TTAAATGTGT TCTCACACTC TATCGGCATA
TTCAAAATAG GCGGTTCGAC TCACTTACAT TTAACGGCCA TGCCAACCAA TTTTGCTTTT
ATATTTACCA GTACCGAAGG TGAATGTTGG ATCGAAGTAG ACTGTTGTCC GCCACGGCAA
TTGCACATTG GTGACTCCGT TTTGATATTA GGTGGTAGGG CCCATCGTTT TGGTGCTTCA
CTTGCGAGCG AACAAAAGAG TTTTGAGACA TTATGGGCCG CCAATGGCTT ACCCAAATTT
GGTGAGACAC GAGACAAACC AATATATTTG AGTGTCGATG AGACTGAGGA TAGCAGTTCA
TTACTCTCGT TGGCATTCAC GGTGGATGAA CCTGCGCATC ACTCTTTGTT GAAGTTACTA
CCCCCTTACA TTTTTGTTTC AAAAGGCAGT CAGTTGGATA CTTGGTTATC AGCCGCATTC
GGTTTTTGTC AACGAGAGCT ATCACATAAT ACGCCGGGTT TCAGCGCAAC TGCGATGAAT
TTTACTAACC TGATATTTGG TGAGTTTGTC CGCTCTTATT TAAACTCGGC GGATTTACCT
CACGAGAGCT GGATGCGTGG ATTATCGGAC CCAAGAATTG GCCGAGCACT AGCAATGATG
CATACCAGAA CCGCAGAACA ACTTATGGTC TCAACCATGG CGAAAGAGGT GGGGATGTCT
CGCACAAGTT TCGCGAGGAT TTTCAAAACA CTGGTTGGCC AATCCCCGAT AGATTATCTT
ATTAACTGTC GAATGCACAA AGCCGCCCAG TACTTATTAG AAGGGAATCA CTCCATTGGT
AAAATCACAG AGATGATTGG ATACCATTCC GAGCGAGCAT TTAGGCAAGC ATTTATTCAA
CGCTTTGGTC TGTCCCCTAG TCAGTTCAAA AAACAACAGC AAAAAATCTA G
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| Protein sequence | MDLLGDVLCS LNVFSHSIGI FKIGGSTHLH LTAMPTNFAF IFTSTEGECW IEVDCCPPRQ
LHIGDSVLIL GGRAHRFGAS LASEQKSFET LWAANGLPKF GETRDKPIYL SVDETEDSSS
LLSLAFTVDE PAHHSLLKLL PPYIFVSKGS QLDTWLSAAF GFCQRELSHN TPGFSATAMN
FTNLIFGEFV RSYLNSADLP HESWMRGLSD PRIGRALAMM HTRTAEQLMV STMAKEVGMS
RTSFARIFKT LVGQSPIDYL INCRMHKAAQ YLLEGNHSIG KITEMIGYHS ERAFRQAFIQ
RFGLSPSQFK KQQQKI
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