| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0846 |
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| Symbol | |
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| ID | 4173987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 997818 |
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| End bp | 998729 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638053849 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660428 |
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| Protein GI | 109897173 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTCG ATGGATTAGA CCTAAACCTG CTGGTGGCCC TAGAGGCATT AATTGAAGAG
CGACACGTTT CCGCTGCAGC GCGTCGTATT CATCTTAGCC AGCCTGCGGT TACCGGTGCC
CTCAAGAGAT TGCGCGAATA CTTCAATGAC GAGCTTCTCG TGCAAAGCGG CCGACGTATG
TTTCTGACTC CAAAGGCAGA GGCACTAGCC GAACCAGTGC ATCGGGCATT ACTGCAAATA
AGAGGTGAGA TAACGCGCGC AGGTAGTTTT AATCCTCTGA CCACGACACG TCATTTTGTA
GTATCCGTTT CTGATTACGC CTATACCATT TTGTTGGCTG ATGTGGTTGC CAAAGCAGCA
TCGTTAGCTC CTTCAGTTAC CTTTGAAATA GTGCCTCCCA ATGAGCAAGT CAATGAGCGC
TTTGAACGAG CAGAAATCGA TTTGTTGTTA ACCGTCGATA GGTTTGCCCT GCCCGGACAC
GCATTTACCG AACTTTGGCG AGACGAAGAG GTGATCATTA GCTGGCAAGG AGCGAATTTT
GATACCATTG ATGCTGACAC TTTCTTTGCT TGTGGGCATG CAGTAGCAAG CTTTGGCCTC
GAGCGCAGAC CATCAATCGC AGACAATCAT ATAAACCAAG CAGGCTGGAA GCGTCGCGTA
GAAGTTCAAT TACCTGATTT CGGCGCATTA TGCCAAGCCG TAGTGGGCAC CAAACGCCTT
GCCACTATGC ACCGCCGATA TGCTCTGCAC TTCGCAAAAC TGTATCCAAT CAAGCTTCAC
TCGACATGGG AACCCTTTCC TAAAATTGTT GAGGGTATGC AATGGCACAA AGTGCGCAAC
TTGGATCCGG GGTTACAGTG GTTAGCTGGT TTGATAAAGG ATGGCGCTGA CGCTGTAAAC
GACCGTTCTT AA
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| Protein sequence | MRFDGLDLNL LVALEALIEE RHVSAAARRI HLSQPAVTGA LKRLREYFND ELLVQSGRRM
FLTPKAEALA EPVHRALLQI RGEITRAGSF NPLTTTRHFV VSVSDYAYTI LLADVVAKAA
SLAPSVTFEI VPPNEQVNER FERAEIDLLL TVDRFALPGH AFTELWRDEE VIISWQGANF
DTIDADTFFA CGHAVASFGL ERRPSIADNH INQAGWKRRV EVQLPDFGAL CQAVVGTKRL
ATMHRRYALH FAKLYPIKLH STWEPFPKIV EGMQWHKVRN LDPGLQWLAG LIKDGADAVN
DRS
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