| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0791 |
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| Symbol | |
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| ID | 4173103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 910873 |
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| End bp | 911784 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638053793 |
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| Product | lipoprotein NlpI |
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| Protein accession | YP_660373 |
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| Protein GI | 109897118 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0277627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAATTA CAATGCAAAA TAAATTTTTC TCACTGGTAT TCTTAGGATT GATATTAAGT
GGTTGCGCTA GTAGCAATCA AGCTCAGCAA AGCCAAGCAC AGATGAGTAA CTTATTACTC
GCGGAACCTG CGCCCATGAG CGTGCGTTCG CAAATGGCGA TTGCTAGGTA TAACCAAATT
CTTGAGAAAG CACCGTTAGA AGATCAAGAA AGGGCAGAGT TACTCCATCA ACGTGGCATG
TTGTATGACA GCGTTGGGCT TGCTGGTTTA GCCCAATACG ATTTTGATCA TGCAATACGT
CTTAAACCAG ATATGGCGGA GGCGTATAAT TCTTTGGGGG TACATTACAC CCAGCAAATG
AATTTTATAC AAGCCTATGA AGCGTTTGAT GCCACATTAG ACATCAATCC TGATTATGAA
TTTGCATTTT TGAATCGTGG GATTGCGCTT TATTACGGTG GCCGTGCCGA TTTAGCCGTG
AATGATTTTA GTGAATTCTA CCGAAATGAT GAATCCGATC CATATCGTGC ACTTTGGTCC
TTTATTGCCC ATAGCGAACT TGACCAAGCA GATGCATTAA TTACGTTAAG CAATAATCGT
GAAAACTTAG ACGAAGACAA CTGGGCGACA CATTTAGTCG ACCTATATCT AGGACGTATA
GATGAACAGG CATTATTAAA CGCCCTAATT CAAGGGGTAA AAAGTCAGCA AGAGTTGACG
GATCGCCTTT GTGAAGCGTA TTTCTATCTG GGAAAATATA ACTCAGCTTT GGGTAACCGC
GGTGTGGCGT CGAATTACTT CAAGTTAGCT CTGAGCACCA ACGTATTTGA ATATGTTGAA
CACAGATATG CGCGACTTGA GCTTGATATG CTGCGCGATA AAGCCGTTGC TGAAAGTGAA
GGGCCACAAT AG
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| Protein sequence | MLITMQNKFF SLVFLGLILS GCASSNQAQQ SQAQMSNLLL AEPAPMSVRS QMAIARYNQI
LEKAPLEDQE RAELLHQRGM LYDSVGLAGL AQYDFDHAIR LKPDMAEAYN SLGVHYTQQM
NFIQAYEAFD ATLDINPDYE FAFLNRGIAL YYGGRADLAV NDFSEFYRND ESDPYRALWS
FIAHSELDQA DALITLSNNR ENLDEDNWAT HLVDLYLGRI DEQALLNALI QGVKSQQELT
DRLCEAYFYL GKYNSALGNR GVASNYFKLA LSTNVFEYVE HRYARLELDM LRDKAVAESE
GPQ
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