| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0753 |
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| Symbol | |
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| ID | 4173931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 857399 |
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| End bp | 858355 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638053755 |
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| Product | D-cysteine desulfhydrase, PLP-dependent enzyme |
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| Protein accession | YP_660335 |
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| Protein GI | 109897080 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGACA CCTTAAACTT AACGCCTATT CTTCAGGACA TTTCCCTCCC CTCCCCTGCG
CAGCAGATAT TCCCGGATTG GGAGCATGCT GATGAAGTAC AATTATGGGT AAAACGCGAC
GATCTAATTC ACCCCATAGT ATCAGGGAAT AAATGGCGTA AATTACGTTA CACACTTGAG
CGAGCTGTTG GCACTGGGGT TCGGCACATC GTCAGCTTCG GCGGTGCGCA TTCGAATCAT
CTACATGCAC TGGGTTATGC TTGCAATAGC CTAAATATAA AGCTAACAGC GATAGTACGT
GGTCACTTTC ATAATAATCC GACACCTATG CTACAAGATT TAGTGGCATG GCAAGCTGAC
GTGCAATTTG CTGATCGTAA GACATATCAA CTGCGCAATG ACGAAACTTA CTTGGCCTCA
TTAGCTCAGC AATATCCTAA TGCTATGTTT ATCCCAGAAG GCGGCTCTTC TGAGTTCGCT
CTCGCTGGCG TGGCGGACAT TGTTCGTGAG CTCACTCAAC GTTATGACTA CTTGTTAACG
CCTGTTGGCA GCGGGGGGAC ATTAGCCGGG CTTATTCATG GTGCGATGAG TCAACCTGTG
CCATTACACA CCAAAATCAT CGGAATCGCT GTGCTTAGAG GTGAGGGGTA TCTCGAAGAG
TTGGTGAGTA ACTTACTGTC ATCCCGGGCT ATGTTGCCAT CGCAAGCTAA CACACGTGAA
CCTATCGCTG ATTGGCACAT TAACCACCAG TTTCATTTTA ATGGCTACGC GAAGGCTACA
CCTGAACTGC ATCAATTTTG TCAGTCGTTC AATGAGACAC TGAGCATTCC TATTGAGCCT
GTGTATAGCG GCAAGCTTTT TTGGGCGGTA AAAGAACTCA TGGCTAAAAA GGCGTTTACA
CCCGGCAGCA AAATTTTGCT ATTGCATACA GGTGGACTAC AAGGCGCTAG AGGCTAA
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| Protein sequence | MNDTLNLTPI LQDISLPSPA QQIFPDWEHA DEVQLWVKRD DLIHPIVSGN KWRKLRYTLE
RAVGTGVRHI VSFGGAHSNH LHALGYACNS LNIKLTAIVR GHFHNNPTPM LQDLVAWQAD
VQFADRKTYQ LRNDETYLAS LAQQYPNAMF IPEGGSSEFA LAGVADIVRE LTQRYDYLLT
PVGSGGTLAG LIHGAMSQPV PLHTKIIGIA VLRGEGYLEE LVSNLLSSRA MLPSQANTRE
PIADWHINHQ FHFNGYAKAT PELHQFCQSF NETLSIPIEP VYSGKLFWAV KELMAKKAFT
PGSKILLLHT GGLQGARG
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