Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0737 |
Symbol | |
ID | 4173088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 838095 |
End bp | 839189 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638053739 |
Product | Zn-dependent hydrolase of the beta-lactamase fold |
Protein accession | YP_660319 |
Protein GI | 109897064 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACCT TTATTTTCAG CACAATCTCG ATACTGATAT GTAGCTTCAT AGGAGCATGC GCGTTGAACA AAGAATTAGT TGCCACGATT GGTGATGAAG AGCCAAGTAG CCCTCATTAC GATGGTGGAA AATTTAAAAA TGCTGTGCAC AGTGAGCCGC CAAGCTTGGG TAAAACACTA GGGATCTTTG CTCGCTACTT TACCGAGAAA AAGGTCGATG CAGTGCCCAA TGAACATGTG CCGGTACAAG CTGTTACGCG TCAGCAATTA GATGCACTAA GTGATGATAA TGTTTACTTA GTTAAGTTGG GCCACTCGTC TATTTTGTTG AAAGTGTTTG GACAGTATTG GCTTATTGAC CCAGTATTTT CTGAACGAGC ATCGCCTTTT TCATTTATCG GGCCAAAGCG CTTTGAGCCG ACGCCCATCA GTATCGAGGA ATTACCACCA ATCGATAAAG TATTCATATC ACATAATCAT TATGATCATT TAGACCAGGC TGCGATCAAG TTACTCAATA CCAAAACGAC CTTGTTTTTG GTGCCGTTAG GCGTTCAAGG AGACTTGCAA AAGTGGGGCG TAAGCAATGA CAAAATAAAA CAGTTTGATT GGTGGCAAGA GTGGCAGACA GAGCATGCCT TAATCGCATT TACCCCTACA CAACATTTTT CCGGTCGCGG GATTGGTGAT GGAAATAAAA CACTGTGGGG TTCTTGGGTG GTTAAATGCG ATGGAAGAAG CTTTTACTTC AGTGGGGACT CAGGCTATTT TTCGGGCTTT AAAGACATAG GTGATAAATA CGGACCGTTC GATGTAACCA TGATTGAAAC CGGCGCATAT GACAAGGATT GGGCGGATAT TCATATGACA CCGGAAGAGT CTGTACAGGC ACATATGGAC TTAGCTGGTA AGGTAATGGT GCCTATCCAT AACGGCACTT TTGATTTGGC GTTTCATCCT TGGTATGAGC CGCTAAACAG GGTTAAGCAA GCTGCTGCGT TGAATAAAGT CGCGTTGAGT ACCCCTGAAT TTGGCCAAGT CTTTACGCTT GACCAAGCGC CTATTCAAAC CCTGTGGTGG AAGGAAGCAC CTTAA
|
Protein sequence | MKTFIFSTIS ILICSFIGAC ALNKELVATI GDEEPSSPHY DGGKFKNAVH SEPPSLGKTL GIFARYFTEK KVDAVPNEHV PVQAVTRQQL DALSDDNVYL VKLGHSSILL KVFGQYWLID PVFSERASPF SFIGPKRFEP TPISIEELPP IDKVFISHNH YDHLDQAAIK LLNTKTTLFL VPLGVQGDLQ KWGVSNDKIK QFDWWQEWQT EHALIAFTPT QHFSGRGIGD GNKTLWGSWV VKCDGRSFYF SGDSGYFSGF KDIGDKYGPF DVTMIETGAY DKDWADIHMT PEESVQAHMD LAGKVMVPIH NGTFDLAFHP WYEPLNRVKQ AAALNKVALS TPEFGQVFTL DQAPIQTLWW KEAP
|
| |