Gene Patl_0737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0737 
Symbol 
ID4173088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp838095 
End bp839189 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID638053739 
ProductZn-dependent hydrolase of the beta-lactamase fold 
Protein accessionYP_660319 
Protein GI109897064 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT TTATTTTCAG CACAATCTCG ATACTGATAT GTAGCTTCAT AGGAGCATGC 
GCGTTGAACA AAGAATTAGT TGCCACGATT GGTGATGAAG AGCCAAGTAG CCCTCATTAC
GATGGTGGAA AATTTAAAAA TGCTGTGCAC AGTGAGCCGC CAAGCTTGGG TAAAACACTA
GGGATCTTTG CTCGCTACTT TACCGAGAAA AAGGTCGATG CAGTGCCCAA TGAACATGTG
CCGGTACAAG CTGTTACGCG TCAGCAATTA GATGCACTAA GTGATGATAA TGTTTACTTA
GTTAAGTTGG GCCACTCGTC TATTTTGTTG AAAGTGTTTG GACAGTATTG GCTTATTGAC
CCAGTATTTT CTGAACGAGC ATCGCCTTTT TCATTTATCG GGCCAAAGCG CTTTGAGCCG
ACGCCCATCA GTATCGAGGA ATTACCACCA ATCGATAAAG TATTCATATC ACATAATCAT
TATGATCATT TAGACCAGGC TGCGATCAAG TTACTCAATA CCAAAACGAC CTTGTTTTTG
GTGCCGTTAG GCGTTCAAGG AGACTTGCAA AAGTGGGGCG TAAGCAATGA CAAAATAAAA
CAGTTTGATT GGTGGCAAGA GTGGCAGACA GAGCATGCCT TAATCGCATT TACCCCTACA
CAACATTTTT CCGGTCGCGG GATTGGTGAT GGAAATAAAA CACTGTGGGG TTCTTGGGTG
GTTAAATGCG ATGGAAGAAG CTTTTACTTC AGTGGGGACT CAGGCTATTT TTCGGGCTTT
AAAGACATAG GTGATAAATA CGGACCGTTC GATGTAACCA TGATTGAAAC CGGCGCATAT
GACAAGGATT GGGCGGATAT TCATATGACA CCGGAAGAGT CTGTACAGGC ACATATGGAC
TTAGCTGGTA AGGTAATGGT GCCTATCCAT AACGGCACTT TTGATTTGGC GTTTCATCCT
TGGTATGAGC CGCTAAACAG GGTTAAGCAA GCTGCTGCGT TGAATAAAGT CGCGTTGAGT
ACCCCTGAAT TTGGCCAAGT CTTTACGCTT GACCAAGCGC CTATTCAAAC CCTGTGGTGG
AAGGAAGCAC CTTAA
 
Protein sequence
MKTFIFSTIS ILICSFIGAC ALNKELVATI GDEEPSSPHY DGGKFKNAVH SEPPSLGKTL 
GIFARYFTEK KVDAVPNEHV PVQAVTRQQL DALSDDNVYL VKLGHSSILL KVFGQYWLID
PVFSERASPF SFIGPKRFEP TPISIEELPP IDKVFISHNH YDHLDQAAIK LLNTKTTLFL
VPLGVQGDLQ KWGVSNDKIK QFDWWQEWQT EHALIAFTPT QHFSGRGIGD GNKTLWGSWV
VKCDGRSFYF SGDSGYFSGF KDIGDKYGPF DVTMIETGAY DKDWADIHMT PEESVQAHMD
LAGKVMVPIH NGTFDLAFHP WYEPLNRVKQ AAALNKVALS TPEFGQVFTL DQAPIQTLWW
KEAP