Gene Patl_0687 details

Gene Information

• Locus tag: Patl_0687
• ID: 4172662
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 784755
• End bp: 785525
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638053689
• Product: hypothetical protein
• Protein accession: YP_660269
• Protein GI: 109897014

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCCG GTCGCGTATA CAACAAAGCC ATGATCGCCT GGTTAACTGA AAATTACCCA 
AAGATGATGA TTAACGAGTT AACAGCGCAA TTTAATCGCA CCTTTAGGAA AACGAAAACC 
CCTGCACAAA TAAAGTCATG TTTGACGAAT CATGGCATTA AAGCAGGCGT TAAACGCACC 
AGAACTGTGC CCAAGTATTC AGAAAAACAC TTGGCTTGGT TAGCTGAAAA CTATTTGTGC 
ATGAAAATCG ACGAGTTAAC CGACGAGTTC AATAAACAAT TCAAGGGTTT TGGTGCGACT 
AAAGCCACTA TTCACAGCAC AGTAAAACGC TACCAGATTA AATCAGGCCG TAATGGTCAA 
TTTAAACAAG GTGAAACATC GTGGAATAAA GGTAAGAAAG GCTTAAACAC AGGTGGCGAG 
GCGGGTTGGT TTAAAAAAGG CACAATACCA GTAAACCATA AATTTGTGGG CTCTGAGCGA 
GTCAATAAAG ACGGCTACAT AGAGGTGAAA ATAGCTGAAC CAAACCTATG GGATTTAAAA 
CAGCGCGTTA ACTATCGTGC AGTACACGGT GAAATTCCAG ACGGCATGGT TGTGATCTTC 
AAAGACAACA ACAAACTAAA TTGCGAACCA GAAAACCTAA TGCTAATTAC GCGTGCTCAA 
CTAGCTGTTA TGAACAAGTT TGGCGTAGGT AAAGCCGCAA AAGACTTAAA GCAATCAGCG 
GTGCTATTTG CTGACCTAAT TATGAAACTA AAAGCGGTGA GTGCCGCCTA A 

 

Protein sequence

MKAGRVYNKA MIAWLTENYP KMMINELTAQ FNRTFRKTKT PAQIKSCLTN HGIKAGVKRT 
RTVPKYSEKH LAWLAENYLC MKIDELTDEF NKQFKGFGAT KATIHSTVKR YQIKSGRNGQ 
FKQGETSWNK GKKGLNTGGE AGWFKKGTIP VNHKFVGSER VNKDGYIEVK IAEPNLWDLK 
QRVNYRAVHG EIPDGMVVIF KDNNKLNCEP ENLMLITRAQ LAVMNKFGVG KAAKDLKQSA 
VLFADLIMKL KAVSAA