Gene Patl_0660 details

Gene Information

• Locus tag: Patl_0660
• ID: 4173315
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 763830
• End bp: 764555
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638053663
• Product: hypothetical protein
• Protein accession: YP_660243
• Protein GI: 109896988
• TIGRFAM ID: [TIGR02001] conserved hypothetical protein, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGTAT TAAAACTTAC CGCATTAGCC GCAGCTGTTC TGGCCAGTTC TGCCGTTAGT 
CAAACCGCTT TAGCAGAAGT GACTGCTAAT GCGAGTGTCA CAAGTAACTA CATTTGGCGT 
GGTTTGACCC AAACCACCAA CGATGCTGCA GTACAAGGTG GTATTGACTA CGCAAATGAA 
AATGGTTTTT ATGTAGGTAC TTGGGTGTCT AACGTCAACT ATGGTGCAGA TGATGTCTAC 
TCTTATGAGC ATGATATGTA CTTCGGCTTC TCAGGTGAGT CAGGCGATAT CACTTATGAT 
GTGGGTTACC TATATTACAA TTATGACAGT GAAGCAGAAT TCGATTTTGC TGAAGTATAT 
GGTTCAGTAG GCTATGGCGG CCTTAGTGCA ACGCTTTCAT TGTTGGCCCA CACAGAAGCT 
GACGAAGGTG AAGGTCGCGA TTACGGCTTT GCTGAAGCGT CATATATATC TGTAGACTAC 
GGCATGCCAG TACTAAACGG CGCTGAGCTA GGATTTCACG TAGGTTACCA TCAAGGTGAC 
TTCGCAGAAG ATTTCAACGG TGTACCAGAT GGTTATGCAG ACTGGGGGAT TTCATTAGCG 
AAAGATGGTT TCAGTTTCGC CGTTACGGGT ACCGATTTAG ACGAAGTTGA AGTGCCAGGC 
GAAGATCCGT TTGATAACGA TTCTATTAAA TTCACCGTTG CTTACGGAAT GGATTTCGAG 
CTTTAA 

 

Protein sequence

MKVLKLTALA AAVLASSAVS QTALAEVTAN ASVTSNYIWR GLTQTTNDAA VQGGIDYANE 
NGFYVGTWVS NVNYGADDVY SYEHDMYFGF SGESGDITYD VGYLYYNYDS EAEFDFAEVY 
GSVGYGGLSA TLSLLAHTEA DEGEGRDYGF AEASYISVDY GMPVLNGAEL GFHVGYHQGD 
FAEDFNGVPD GYADWGISLA KDGFSFAVTG TDLDEVEVPG EDPFDNDSIK FTVAYGMDFE 
L