| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0558 |
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| Symbol | |
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| ID | 4172245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 648254 |
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| End bp | 648895 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638053560 |
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| Product | toluene tolerance |
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| Protein accession | YP_660141 |
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| Protein GI | 109896886 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.254728 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACC TAACACGAAT ATTTAGTGCT GCACTTATTT TAATTTTTAG TAGTGTTGCC
ACTGCAGAAG AGGCTAACCC TTATAAATTA CTAGAAGACG TTGCCTCAGA AACCTTTGCC
AGAATCAAAG ATCAGCACGC TGAGATACAG AAAAACCCAG AAATTCTAAG GGACATCATC
GAGCAGGATC TTCTGCCCTA TATCGACTAC AACTTTGCCG CACTTAAGGT TTTAGGTAAG
CACTTTAGAA CTGTCCCTAA AGACAAAATA CCTGAATTTA TTCAAGTGTT TCGCCAATAC
CTGATTACCA CTTATGCACT GGCATTAACC TATTACAATG GCCAAGAGGT GGTCTTCCAG
CCGCTGCGCG ATGCACCTGA AGACAAGACA GCAACAGTGC GAGCAGTGGT TAAAGAAGAC
GGTCGTCCAG ACATCAAGAT TTCATTCAAA CTACGTAAAA ATACCAAGAC CAATGAGTGG
AAGGCGTACG ACATGGTTGC TGAGGGTATT AGCCTGTTAT CCAGCAAGCA AAGCGAGTAC
GAATCAATAT TACGTCAAGA CGGTATTCAA AAAGTGATCG ACATCATGAA AGAAAAAATC
AAGCAACCAA TTACGCTCGA GCATCCAGAA GAGGAAAGCT AA
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| Protein sequence | MKHLTRIFSA ALILIFSSVA TAEEANPYKL LEDVASETFA RIKDQHAEIQ KNPEILRDII
EQDLLPYIDY NFAALKVLGK HFRTVPKDKI PEFIQVFRQY LITTYALALT YYNGQEVVFQ
PLRDAPEDKT ATVRAVVKED GRPDIKISFK LRKNTKTNEW KAYDMVAEGI SLLSSKQSEY
ESILRQDGIQ KVIDIMKEKI KQPITLEHPE EES
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