| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0529 |
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| Symbol | |
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| ID | 4173513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 618306 |
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| End bp | 618980 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053531 |
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| Product | exonuclease, RNase T and DNA polymerase III |
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| Protein accession | YP_660112 |
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| Protein GI | 109896857 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.56514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA AACTAAAAAA GTGGTTTGCA CCTAAGCCAC CTATCCCAGA AGCTTGGTTA
GGCATGCCAC TGGCTGACAT TCCTTTTTTA TGTATTGATT TAGAGCTCAC GTCCCTTGAT
TTGAATGACA CTAAAATTCT ATCGATAGGG TGGGTTGAGG GTAAGGGCAA GCAGATTTCT
CTGCAAAGTT GTTATTATCA GGTGATATCA ACAACAGCCT CGTTAAATCA AAGCCCGGTA
ATCCACGGTT TAACCGCTGA TCATATTGCC CAAGGGCAAC CGTTGCGTAT CGCGTTGGAG
GCGCTAAAAC AATTTGCCAG TAGTCATGTA TGGGTGTTCC ATTGTACCCA TCTTGATATG
ACGGTGTTAA ACGGTGTATT TAAAAAGTTG AATATCCCTC TTCCCACAGT CGTAACGCTA
GACACATTGC GTTTTGGACT GTATCAACTG ACTAAGAATT TACGTCCGCC CCCGCCAAAT
GCTGTGGTGT TACCCGTGTG TCGCGCGCGT TATAACCTGC CAGCGGTACC GGCACACAAT
GCTCTGGACG ATGCGATGGC GACTTTGGAA TTACTGTTTG CGCAAATCCA AAAATTTGCG
CCGAAAAATA CCGATACGTT AAAGACGTTG ATGGTGACAG ATGCACTTGA AGTCTTTCCT
GCGCCTACTG ATTGA
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| Protein sequence | MFKKLKKWFA PKPPIPEAWL GMPLADIPFL CIDLELTSLD LNDTKILSIG WVEGKGKQIS
LQSCYYQVIS TTASLNQSPV IHGLTADHIA QGQPLRIALE ALKQFASSHV WVFHCTHLDM
TVLNGVFKKL NIPLPTVVTL DTLRFGLYQL TKNLRPPPPN AVVLPVCRAR YNLPAVPAHN
ALDDAMATLE LLFAQIQKFA PKNTDTLKTL MVTDALEVFP APTD
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