| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0455 |
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| Symbol | |
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| ID | 4173228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 529764 |
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| End bp | 530396 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638053458 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_660039 |
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| Protein GI | 109896784 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0942122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATA CTAAAGAAAT GAAAAAGGTA TTGTTTGGGC CAATCCTAGA CAATAACCCA
ATAGCACTGC AAATACTGGG CGTATGTTCA GCATTAGCGG TAACCACTAA GTTAGAAACG
GCATTAGTAA TGTCACTTGC TCTTACAGCA GTAACGGCAT TCTCTAACTT GTTTATCTCT
ATGATCCGTT CACAGATACC TTCATCAGTA CGTATTATCG TGCAGATGAC GATTATTGCG
TCATTGGTAA TCGTAGTGGA TCAAATCCTG AAAGCTTATT CGTACGAGAT ATCCAAACAG
CTGTCGGTAT TCGTTGGCTT GATTATCACC AACTGTATCG TAATGGGTCG AGCTGAAGCC
TTTGCTATGA AAAGCCCGCC ATTTATCAGT TTCCTTGACG GGATTGGTAA CGGCTTAGGC
TACTCGTTTG TATTGATTGT TATCGGTACT ATTAAAGAGT TGTTCGGTTT CGGTACTATT
CTCGGTTTCG AAATTTTACC ACTCATTCAA AATGGCGGTT GGTATCAAGG TAATGGTTTA
TTGATTTTAC CTTTCAGCTC GTTCTTCTTA ATCGGTGGTT TAATTTGGTT CATCAGAACT
ATTAAGCCTG AACAAGTAGA GCCTAAGGAG TAA
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| Protein sequence | MADTKEMKKV LFGPILDNNP IALQILGVCS ALAVTTKLET ALVMSLALTA VTAFSNLFIS
MIRSQIPSSV RIIVQMTIIA SLVIVVDQIL KAYSYEISKQ LSVFVGLIIT NCIVMGRAEA
FAMKSPPFIS FLDGIGNGLG YSFVLIVIGT IKELFGFGTI LGFEILPLIQ NGGWYQGNGL
LILPFSSFFL IGGLIWFIRT IKPEQVEPKE
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