| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0431 |
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| Symbol | |
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| ID | 4173722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 509893 |
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| End bp | 510513 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638053434 |
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| Product | nucleoside diphosphate pyrophosphatase |
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| Protein accession | YP_660015 |
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| Protein GI | 109896760 |
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| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
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| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000737623 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTAAAA TTCAGCAGTT TTCCAGCAAA GACGTGGAAG TTACCCGCAA AGAACCACTT
TACGACGGTT TTTTTAAAAT GGTGAAGTAC CATTTCAAGC ATAAATTGTA CAAAGGCGGT
TGGAGTGACT TGATACAGCG AGAAATATTT GAACGTGGGC ATGCGGTTGC GGTTCTGCCA
TATGATCCCC ATTTAAAAGA GTTCGTTATG ATTGAACAAA TTCGGATTGG CGCTATGGCC
ACATCGGATT CGCCGTGGTT GTTAGAGATT GTGGCTGGTA TCATTGACCC GGGCGAAACA
CCTGAAGCGG TATGTTATCG CGAGGCGCAT GAAGAGGCGG GGGTGACGAT CACCCACCTT
AAGAAGGCCA TCAGTTATCT TGCTAGCCCA GGCGGCACAA CTGAAAGGTT ACATATATAT
GTGGCCCAAG TTGATGCGAG TCAAGCGAAA GGTGTGCATG GACTCGACCA TGAGAGTGAA
GATATTTTGG TGCACCGAGT GCCAGAAGAG CAAGCTCTGG AGTGGATTAA TCAAGGAAAG
ATCGACAACG CAGCGACACT TATCGCGCTG CAATGGTTTG CTATGAATAA ACAACGAGTA
CTTGATGACT GGAAAGAATG A
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| Protein sequence | MSKIQQFSSK DVEVTRKEPL YDGFFKMVKY HFKHKLYKGG WSDLIQREIF ERGHAVAVLP
YDPHLKEFVM IEQIRIGAMA TSDSPWLLEI VAGIIDPGET PEAVCYREAH EEAGVTITHL
KKAISYLASP GGTTERLHIY VAQVDASQAK GVHGLDHESE DILVHRVPEE QALEWINQGK
IDNAATLIAL QWFAMNKQRV LDDWKE
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