Gene Patl_0352 details

Gene Information

• Locus tag: Patl_0352
• ID: 4173175
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 408761
• End bp: 409405
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638053351
• Product: redoxin
• Protein accession: YP_659937
• Protein GI: 109896682
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGACTA ACGTAAAAGC GACAATCGGT TGTTTACTTC TTTTACTCGC TGTTCTTTCC 
TCGACTGTGT TAGCGTTTGA GCGCACTACC ATTGCTGAAG ATGCCCAAGA TGTCACCCCA 
TTGCTAGTCG GCCATTTTGC CCCGAACACC AAATTGCAAA CCGCTGATGG CGCGCCAGTC 
AGCTTGAAAG CCATCACTAT GCAAAAGCCC ACTGTGTTAA TTTTTTATCG TGGTGGCTGG 
TGTCCTTACT GTAATCGTCA GTTGGCTGGA CTGAAAGACA TTGAAAAATC TCTGGATGAT 
TTGGGTTATC AAATATTAGC GATATCCCCT GAAACGCCAG CGCAACTGCA AGCTCAAAAA 
CTGCAAAGCA AATTTACCGT ACAGTTACTT TCTGATAGCA AGCTAGAGAC CATACGCGGT 
TTTGGTATTG GTTATTATGT GCCTGAAGAC AAAACCGCTC AGTACAAAGA AAAGAAAGGC 
ATAGAGTTAA ATGCATCAGC TGAAGCAGGG CGGGGTGTAT TACCAGCACC AGCTGTGTTT 
ATTCTAGATG AACAGGGGGT GATCAAATTC AGTTACGTGA ACCCTGACTA CAAACAACGA 
TTATCGCCTG AATTCCTTTA TCAAGCGGCT AAGTATTCGC TTTAA 

 

Protein sequence

MMTNVKATIG CLLLLLAVLS STVLAFERTT IAEDAQDVTP LLVGHFAPNT KLQTADGAPV 
SLKAITMQKP TVLIFYRGGW CPYCNRQLAG LKDIEKSLDD LGYQILAISP ETPAQLQAQK 
LQSKFTVQLL SDSKLETIRG FGIGYYVPED KTAQYKEKKG IELNASAEAG RGVLPAPAVF 
ILDEQGVIKF SYVNPDYKQR LSPEFLYQAA KYSL