Gene Patl_0244 details

Gene Information

• Locus tag: Patl_0244
• ID: 4173991
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 286546
• End bp: 287316
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638053243
• Product: S1/P1 nuclease
• Protein accession: YP_659830
• Protein GI: 109896575

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.863137
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAAAT TTATAGTTGG CCTTCTTATG GCTTCGTTCA GCGTCAATGT GTTGGCTTGG 
GGGCAAATAG GACATCGAGT AACAGGTGCA ATTGCGCAGC AACATCTCAC GCCACAGGCT 
CAAGCGGCTA TCAGTGCTTT GCTACCAACT GAAGACTTGG CCGAAGCCTC GACTTACCCC 
GATGAAATGC GCTCAAGCCC AGATGATTTT TGGCAGAAAA AAGCAGGTCC GTTTCACTAT 
GTGACTATTC CTAAAGGTCA GACTTATGCA GATGTCGGTG CACCTGAGCA GGGGGATGGC 
GTATCGGCTT TAAAAATGTT TACGGCAAAT TTAACCAGCA GCCAGACCAG CAAAGCAGAA 
AAGCAACTCG CACTACGCTT TATCGTGCAT ATAATCGGAG ATTTGCATCA GCCTTTGCAT 
GCTGGAAATG GCACTGACCG TGGCGGTAAT GATTTTAAAG TGAACTTTTT TTGGCAGGAT 
TCTAACTTGC ACAGAGTGTG GGATAGTGAG CTTCTTGATC AGCGTCAGCT TTCTTATACC 
GAGTGGACAG CAATATTGAA TCGCAAAATT AGCGCGCAGG ATATAAATGA CTGGAACACA 
ACTGATCCTA AAGTTTGGAT AGCAGAAAGT GTGAAAATTC GCGACGAGAT TTACCCTTCG 
CAAGAAACGA TATCTTGGGA TTACTTATAC CATCATTTAC CGCAAGCGAA GCAGCGCCTA 
AAAATGGCAG GTATTCGAAT TGCTGCTTAT TTGAATGAGA TTTATAAATA A 

 

Protein sequence

MYKFIVGLLM ASFSVNVLAW GQIGHRVTGA IAQQHLTPQA QAAISALLPT EDLAEASTYP 
DEMRSSPDDF WQKKAGPFHY VTIPKGQTYA DVGAPEQGDG VSALKMFTAN LTSSQTSKAE 
KQLALRFIVH IIGDLHQPLH AGNGTDRGGN DFKVNFFWQD SNLHRVWDSE LLDQRQLSYT 
EWTAILNRKI SAQDINDWNT TDPKVWIAES VKIRDEIYPS QETISWDYLY HHLPQAKQRL 
KMAGIRIAAY LNEIYK