| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0226 |
|---|
| Symbol | envZ |
|---|
| ID | 4171713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 268761 |
|---|
| End bp | 270059 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638053225 |
|---|
| Product | osmolarity sensor protein |
|---|
| Protein accession | YP_659812 |
|---|
| Protein GI | 109896557 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGATTCC TTCCTAAAAG TGCTTTCGGG CAAACGGTAC TGCTGATTGG TATGTTGTTG
CTGATCAATC AAGTGGTATC GTATCTGTCT GTGACCTACT ACTTCATCCG CCCCAGTTAC
CAGCAAATCA ATAACTTGTT GGCCACCCAG ATCAACCTCG TCTTTATCGA AGAAATCGAC
CATAAAGATC CCGAGCTGCA TAAACGCTTT TTTGCCGCGA CTGGTATGCG CTTATTGAGT
AATGAAAAAG CGCAAGAGGA AGGGGTAGAG CAGGCGATTT ATTATCCTTA TTTGTCGCGC
CAAATGAGTT TGAAACTCGG CGGCGAAGCG GAAGTACGTA TTACTCAGGG GAATCCGTAT
TTGGTCTGGG TTAAACCGCC ACAAGATCCT AGCGTCTGGG TCACTATTCC CATGCTAAGC
CACGGTGAGT CGGACATTTC GCCATTGACC ATTTACTTGC TGGTGATCGG TATTTTGAGT
GTCGCCGGCG GTTGGATATT CGTGCGCAGG CTGAATAAAC CATTGCAAGC CTTGCAACAT
GCGGCTATTG AAGTAGGGCG AGGAAATATA CCGCCGCCGC TCGAAGCGCA AGGCTCAACT
GAATTGATGG CTGTTACTCA GGCATTTAAT CAAATGGCAA AGGGAATAAA GCAACTTGAA
GATGACAGGG CGCTGTTAAC GGCCGGTATC TCTCATGATT TACGCACACC CTTGACCCGC
ATTCGTTTAG CCACCGAAAT GCTCCCTGAA GCCCAAGATT GGCTAAAAGA GGGCATAGTG
AACGACATTG AAGACATGAA CGAAATTATT GATCAGTTCA TTAATTATGT GCGTCAAGAT
CAACAAGAAA GCATGGTTGG CGTGGACGTC AACGATCTTA TCCGTGATGC AGTTCAAGTA
CGTAACATTG AAGAGCACCA CAATATCCAC TTACACCTAA AACCTATCCC TACCGCTTGT
ATGCGCAGGG TCGCGCTTAA GCGGGTGTTA GATAATCTGA TTGAAAATGC TTTTCGCTAT
GGTAGCGAAG ACATTGAAAT TCGCTCTGGT TACGATAAGG CGCGTAATTT GCTGTTTTTC
TCGATCCGAG ATTTCGGCCC AGGTATTCCT GATACGCAAA TCGAAGGTTT GTTCAAACCT
TTCACTCAAG GCGATAAGGC CAGAGGCAGT TTGGGCTCAG GGTTAGGGCT TGCCATTATC
AAGCGAATTG TCGATATGCA CAGCGGCGAA GTGACATTAA AAAACCACCC TGAAGGTGGT
TTGATCGCCA GTATTTTTAT TCCTCACACT TGCCCTTAA
|
|---|
| Protein sequence | MRFLPKSAFG QTVLLIGMLL LINQVVSYLS VTYYFIRPSY QQINNLLATQ INLVFIEEID
HKDPELHKRF FAATGMRLLS NEKAQEEGVE QAIYYPYLSR QMSLKLGGEA EVRITQGNPY
LVWVKPPQDP SVWVTIPMLS HGESDISPLT IYLLVIGILS VAGGWIFVRR LNKPLQALQH
AAIEVGRGNI PPPLEAQGST ELMAVTQAFN QMAKGIKQLE DDRALLTAGI SHDLRTPLTR
IRLATEMLPE AQDWLKEGIV NDIEDMNEII DQFINYVRQD QQESMVGVDV NDLIRDAVQV
RNIEEHHNIH LHLKPIPTAC MRRVALKRVL DNLIENAFRY GSEDIEIRSG YDKARNLLFF
SIRDFGPGIP DTQIEGLFKP FTQGDKARGS LGSGLGLAII KRIVDMHSGE VTLKNHPEGG
LIASIFIPHT CP
|
|---|
| |