Gene Patl_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0208 
Symbol 
ID4171754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp251449 
End bp252048 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content46% 
IMG OID638053207 
ProductTetR family transcriptional regulator 
Protein accessionYP_659794 
Protein GI109896539 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.41994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGTA AACGTACTTT TGACGATGAA AAGGCACTTG AGTCAGCTAT GGGCGTCTTT 
TGGAAGAAAG GCTACGCTGG TGCGTCTTTG GCTGAACTTA CCCAAAGTAT GGGGATCAAT 
AAGCCCAGCA TGTATCGCAC ATTCGGTAAC AAAGAAGCCT TGTTCTTAAA AGCGACGCAA 
AGATACATCG AACAAAATGC CATGCCGCAC TTTGTTTATC TGCATCAGGC CGGCGTGTCG 
TTAGATAAGC GCATAAAAAA CTATATGGTG TCTGTGGTCA GCGAGCAATG CACCCCGAGC 
GATCCAAAAG GGTGTTACAT ATTCTTGTGC CAATCTGAAA TTGCCGGTGG CGATATCCCT 
GAGCTTCCCA GTAATTTGTT GATTGAGGCG GGCAATAAAA TTCAAGAAGA ATTAATCAAT 
ATTTTCACCA CGGACCCAGA AGCAATCGCC CTTGGCTTAG ACACTCGCGC AGCCAGTATC 
GCTTTATGTA TCATTACGAC ACTTAGAGGC ACGGCCTCAA TGGCAAGAGC TGGCGTTACA 
TTAAGTGAGT TAGAAGACGT AATCGAACAT AGTCTACGCG GCATCGGGCT CGTATCTTAA
 
Protein sequence
MSGKRTFDDE KALESAMGVF WKKGYAGASL AELTQSMGIN KPSMYRTFGN KEALFLKATQ 
RYIEQNAMPH FVYLHQAGVS LDKRIKNYMV SVVSEQCTPS DPKGCYIFLC QSEIAGGDIP 
ELPSNLLIEA GNKIQEELIN IFTTDPEAIA LGLDTRAASI ALCIITTLRG TASMARAGVT 
LSELEDVIEH SLRGIGLVS