Gene Patl_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0166 
Symbol 
ID4174030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp197510 
End bp198442 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content45% 
IMG OID638053165 
Producthypothetical protein 
Protein accessionYP_659752 
Protein GI109896497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.927956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTA GCTGGCGCGA GTTTATAAAG CAGTACTTTA GCAAGCCATC AAAATTTCAC 
TCGATTGGAA TTGAAATGGG CGATGCTGAA TTGCACCTTA ATGTTATTCA AAAAAAATCT
GGTGCCTATC AGTGGGTAGA GCAGCACACT TTGCCTATGC AAGATTGGGC GAAACATTTG
CAAGAGTACG TAGCGAACCA TAATTTAGCT CGCACCCCTT GTTATATTGC ATTGGGGTTA
AATAAATATC AGCACTTTCA AGTAGATAGG CCTGAAGTGG AAGAGCAAGA AATTGCTTCC
GCTCTCAAAT GGCAAATCAA AGAACAGCTC ACCAGTACAG ATGAGCATGT CTTTGATTAC
TACGACCACC CAGCAGTAAT TGGCGGTAAA AAAAGGGTCA ATGTGGTGGC TATTAGCCGC
GCTCACATTC ACGGGATAAT CAAAGGCATT ACCCGCGCAG AGTTAAAACT CAATACCATT
ACCATAGAAG AGTTGGCAAC CAGCGAGCTT CTGCCAACGG ATGATGATGC TGTTTTGACT
TTGTTCCAAG AGAATGGCGG TCAGATAAAT TTAAATATCG TCAAACAAGG CAAGTTATTC
TTCTCACGGC GTTTGAAAGG CTATGAAAAC TTGGCTAGCT TCTCGTTAGA GGAGTTCCAA
ATGGGGATGG GAGATACCTT GAGTGTTGAA ATTCAACGCT CCATGGACTA TTTCGAGAGT
CAACTGCGTC AAGCCCCCGT GCGCAAGATT GTCGTTCACC TCAATTCATC TATTCAACAA
GAGCTGGCGA AGGTCATCCA AGAGCTGACC TTTATGCCTG TCACCGTCAT GGCGCTGCCT
TTAGCATCGC CCCAGCCAGA GAAAATGGTC AGTTTAGCGA GCTTAGGTGC TGCGTTGTCA
GATGTAAAAT TGAATACTGA GGCCGCACAA TGA
 
Protein sequence
MRISWREFIK QYFSKPSKFH SIGIEMGDAE LHLNVIQKKS GAYQWVEQHT LPMQDWAKHL 
QEYVANHNLA RTPCYIALGL NKYQHFQVDR PEVEEQEIAS ALKWQIKEQL TSTDEHVFDY
YDHPAVIGGK KRVNVVAISR AHIHGIIKGI TRAELKLNTI TIEELATSEL LPTDDDAVLT
LFQENGGQIN LNIVKQGKLF FSRRLKGYEN LASFSLEEFQ MGMGDTLSVE IQRSMDYFES
QLRQAPVRKI VVHLNSSIQQ ELAKVIQELT FMPVTVMALP LASPQPEKMV SLASLGAALS
DVKLNTEAAQ