| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0156 |
|---|
| Symbol | |
|---|
| ID | 4172643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 189179 |
|---|
| End bp | 189631 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638053155 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_659742 |
|---|
| Protein GI | 109896487 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.417204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAACA CGATTCAATT CAAACACATA ACGTCAGCCC TCGGGCTGGC CATAATGTTG
TTACAGCCTC AAGTCAGCTA TGCAAATGAC GCTCATACCA AGATGAAATA CACCTTGTTT
TGCAGTGGTT GTCATACCGC GGATGGCCGC GGAAGTGGTG ATCCGCGCAT ACCCGACATG
CGCAACTTCG TAGGCTATTT TGCCGCCGTT GAAGGTGGCC GTGAATTTTT GATTCAAGTA
CCTGGCGTGT CAACCGCCCC CTTAAAAAGT AAGGAGTTAG CGCAAATCGT CAACTGGATG
CTGCGCTCCT TTAGTGCAGA TCAATTACCA GATGACTTCA AACCGTTTGA TGAACAAGAG
GTGGAGCGAT TGCGGCAGTA CGTTCTACGT AGCGAATTGG GAGACACGCG CAAAGCGCTG
GTTACCCGAA TAGAAGAGTA CAAAAAAAAA TAA
|
|---|
| Protein sequence | MPNTIQFKHI TSALGLAIML LQPQVSYAND AHTKMKYTLF CSGCHTADGR GSGDPRIPDM
RNFVGYFAAV EGGREFLIQV PGVSTAPLKS KELAQIVNWM LRSFSADQLP DDFKPFDEQE
VERLRQYVLR SELGDTRKAL VTRIEEYKKK
|
|---|
| |