| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0111 |
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| Symbol | |
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| ID | 4171793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 126077 |
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| End bp | 126283 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638053110 |
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| Product | hypothetical protein |
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| Protein accession | YP_659697 |
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| Protein GI | 109896442 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain |
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| TIGRFAM ID | [TIGR02443] conserved hypothetical metal-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0242555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGACGA AAATTAAAAA GCGTTTTATC GCTGGGGCCA CCTGCCCTCA ATGTAAAAGC
ATGGATACAC TGATGCTTTA CTTCGAGAAC AATGTTGAAA AGATGGAATG TGTACAGTGC
CATTATCAAC AAACCCAAAC AGATAAAGAA GTGACGCAAG CCTCTCGCCA AAGCGAAAAC
GTGATTGGCG TATTTAAACC CGAATAA
|
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| Protein sequence | MTTKIKKRFI AGATCPQCKS MDTLMLYFEN NVEKMECVQC HYQQTQTDKE VTQASRQSEN
VIGVFKPE
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