Gene Pars_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2296 
Symbol 
ID5055633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp2056236 
End bp2056610 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content55% 
IMG OID640469848 
Producthypothetical protein 
Protein accessionYP_001154492 
Protein GI145592490 
COG category[S] Function unknown 
COG ID[COG2411] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.725623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0111522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAAGAG ACGTAGGCCT TGGCCCCTAT ATGCGGTTTA AGAAAAAGTA TCTAGATGCC 
GTGTTGGCGG GGAGGAAGCG GGTCACCGTG AGGTATGGAA TAGTGAGACC TCGGTTTAGT
CTAGTGTACG TCGTGTGTTG CGGCGAGATC TACGGCGAGG CGCTTATTAC CCGGGTGGTT
TACACCAAGA TGGGAAGCCT AGGCGACGAC GTGGTATCCG CAGAGGGCAT GGAGACTAGG
GAGGAGCTGA TGGGCGAACT TAGAGAGATC TACGGAGATG TGAGCGACGA CGACCCCGTC
TCTGTGATAT ATTTCACGCT GGTTAGGAAA TACGACAAGC CGGTCCCCCT GGCACACGGG
CGCGGAGGTT ATTAA
 
Protein sequence
MGRDVGLGPY MRFKKKYLDA VLAGRKRVTV RYGIVRPRFS LVYVVCCGEI YGEALITRVV 
YTKMGSLGDD VVSAEGMETR EELMGELREI YGDVSDDDPV SVIYFTLVRK YDKPVPLAHG
RGGY